 |
Job Description | P0AC00 | Confidence | 42.79% | Date | Thu Jan 5 11:16:48 GMT 2012 |
Rank | 196 | Aligned Residues | 65 |
% Identity | 9% | Template | c1mwmA_ |
PDB info |
PDB header:structural protein | Chain: A: PDB Molecule:parm; |
PDBTitle: parm from plasmid r1 adp form
|
Resolution | 2.00 Å |
|
 |
  |   |
16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | |
|
. | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | M | V | Q | E | V | E | K | V | L | S | H | D | V | P | L | V | H | A | I | V | E | E | M | V | K | . |
. |
R | D | I | D | R | I | Y | F | V | A | C | G | S | P | L | N | A | A | Q | T | A | K | H | L | A | D | R | F | S | D | L | Q | V | Y | A | I | S | G | W | E | F |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   | . | . |   |   |   |   |   |
|   |   |   |
|   |
|   |
|   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
| . |
|
|
|   |
|
|   |   |   |
|   |   |   |   |   |   |   | . |   |   |   |
|   |
|   |   |   |
|   |   |
Template Sequence |   |
N | K | I | S | I | V | T | E | A | M | N | E | A | L | R | K | L | E | Q | R | V | L | N | T | L | N | E | F | S | G | Y | T | H | V | M | V | I | G | . |
G | G | A | E | L | I | C | D | A | V | K | K | H | T | Q | I | R | . |
D | E | R | F | F | K | T | N | N | S | Q | Y |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S |
|
|  |  |  |  |  | S | . | T | T |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
| . | G | G | G |  |  |
|
| S |
| G | G | G |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |  |
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|
|
|  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
243 | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | |
. | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | |
. | . | 300 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|