Job Description P0C960 Confidence 99.97% Date Thu Jan 5 11:30:08 GMT 2012 Rank 4 Aligned Residues 135 % Identity 19% Template c3mgwA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:lysozyme g; PDBTitle: thermodynamics and structure of a salmon cold-active goose-type2 lysozyme Resolution 1.75 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.					.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.
Query SS confidence																																																		.	.	.	.
Query Sequence		A	K	V	P	V	Q	R	A	M	Q	W	M	P	I	S	Q	K	A	G	A	A	W	G	V	D	P	Q	L	I	T	A	I	I	A	I	E	S	G	G	N	P	N	A	V	S	K	S	N	.	.	.	.	A	I	G	L	M	Q	L	K	A	S	T	S	G	R	D	V	Y	R	R	M	G	W	S	G	E	P	T	T
Query Conservation																																																		.	.	.	.
Alig confidence																																																		.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	E	H	D	L	V	R	M	N	K	Y	K	E	L	I	T	R	V	G	Q	K	H	G	L	D	P	A	I	I	A	G	I	I	S	R	E	S	R	A	G	S	A	L	D	H	G	W	G	D	H	G	K	G	F	G	L	M	Q	V	D	K	R	Y	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	I
Template Known Secondary structure											T	T												T															T	T	T	T	T		B	T	T			T	T	T	T			T	T	T	T			T	T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.															.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		S	E	L	K	N	P	E	R	N	I	S	M	G	A	A	Y	L	N	I	L	E	T	G	P	L	A	G	I	E	D	.	.	P	K	V	L	Q	Y	A	L	V	V	S	Y	A	N	G	A	G	A	L	L	R	T	F	S	S	D	R	K	K	A	I	S	K	I	N	D	L	D	A	D	E	F	L	E	H	V	A	R
Query Conservation																																.	.
Alig confidence																																.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	G	A	W	D	S	E	K	H	I	S	Q	G	T	E	I	L	I	E	F	I	R	R	I	Q	A	K	F	P	V	W	P	K	E	H	Q	L	K	G	G	I	S	A	Y	N	A	G	D	K	N	V	R	T	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R
Template Known Secondary structure			S		T	T	S																							T	T	S																	S	T	T			S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.																									.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	H	P	A	P	Q	A	P	R	Y	I	Y	K	L	E	Q	A	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	D	V	G	T	T	G	G	D	Y	S	N	D	V	V	A	R	S	Q
Template Known Secondary structure		T	T	T	T	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions