Job Description P0C960 Confidence 99.97% Date Thu Jan 5 11:30:08 GMT 2012 Rank 6 Aligned Residues 135 % Identity 18% Template c3gxkB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:goose-type lysozyme 1; PDBTitle: the crystal structure of g-type lysozyme from atlantic cod2 (gadus morhua l.) in complex with nag oligomers sheds new3 light on substrate binding and the catalytic mechanism.4 native structure to 1.9 Resolution 1.90 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.									.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.
Query Sequence		A	K	V	P	V	Q	R	A	M	Q	W	M	P	I	S	Q	K	A	G	A	A	W	G	V	D	P	Q	L	I	T	A	I	I	A	I	E	S	G	G	N	P	N	A	V	S	K	S	.	.	.	.	.	.	.	.	N	A	I	G	L	M	Q	L	K	A	S	T	S	G	R	D	V	Y	R	R	M	G	W	S	G
Query Conservation																																																	.	.	.	.	.	.	.	.
Alig confidence																																																	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	Q	T	D	A	G	R	M	E	K	Y	K	S	F	I	N	N	V	A	K	K	H	V	V	D	P	A	V	I	A	A	I	I	S	R	E	S	R	A	G	N	V	I	F	N	T	T	P	P	G	W	G	D	N	Y	N	G	F	G	L	M	Q	V	D	K	R	Y	H	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										G	G	G												T															G	G	G	T	T	T	T	T	S	S	S	T	T			T	T	T	T			T	T	T	T			T	T	T	S	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.
Query SS confidence																																							.	.
Query Sequence		E	P	T	T	S	E	L	K	N	P	E	R	N	I	S	M	G	A	A	Y	L	N	I	L	E	T	G	P	L	A	G	I	E	D	P	K	V	.	.	L	Q	Y	A	L	V	V	S	Y	A	N	G	A	G	A	L	L	R	T	F	S	S	D	R	K	K	A	I	S	K	I	N	D	L	D	A	D	E	F	L	E
Query Conservation																																							.	.
Alig confidence		.	.																																				.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	E	P	R	G	A	W	N	S	E	E	H	I	D	Q	A	T	G	I	L	V	N	F	I	Q	L	I	Q	K	K	F	P	S	W	S	T	E	Q	Q	L	K	G	A	I	A	A	Y	N	T	G	D	G	R	V	E	S	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.				S		T	T	S																							T	T	S																	G	G	G				S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	V	A	R	N	H	P	A	P	Q	A	P	R	Y	I	Y	K	L	E	Q	A	L	D
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	E	S	V	D	S	R	T	T	G	K	D	Y	S	N	D	V	V	A	R	A	Q
Template Known Secondary structure		.	.	T	T	T	T	T	T	S	G	G	G
Template Predicted Secondary structure		.	.
Template SS confidence
				162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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