Return to main results Retrieve Phyre Job Id

Job DescriptionP25889
Confidence97.73%DateThu Jan 5 11:42:42 GMT 2012
Rank200Aligned Residues169
% Identity22%Templated2d69a1
SCOP infoTIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   94.....100........ .110.........120.........130. ........140.........150.........160......
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Query Sequence  RLKEDYPDKVLIASI. . . . MGENEQQWEELARLVQEAGADMI. . . ECNFSCPQMTSHAMGSDVGQSPELVEKYCRAVKRG
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Template Sequence  REFMGVKDRPLTATVPKPKMGWSVEEYAEIAYELWSGGIDLLKDDENFTSFPFNR. . . . . . . FEERVRKLYRVRDRVEAE
Template Known Secondary structure  T

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   144.....150.........160.........170.........180.........190........ .200.........210......
 
   167..170.. .......180.........190.........200.........210.........220.........230.........240....
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Query Sequence  STLPML. . AKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVKPIALRFIQQ
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Template Sequence  TGETKEYLINITGPVNIMEKRAEMVANEGGQYVMI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DIVVAGWSALQY
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B

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   217..220.........230.........240.........250. ........260...
 
   245....250........ .260.........270.........280....... ..290.........300..
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Query Sequence  MRTHPELRDFPISG. . . . . . . . . . . . IGGIETWEDAAEFLLLGAATLQVTTGIMQ. . YGYRIVEDMASGLSH
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Template Sequence  MREVTEDLGLAIHAHRAMHAAFTRNPRHGITMLALAKAARMIGVDQIHTGTAVGKMAGNYEEIKRINDFLLS
Template Known Secondary structure  T

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   264.....270.........280.........290.........300.........310.........320.........330.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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