 |
Job Description | P25889 | Confidence | 99.20% | Date | Thu Jan 5 11:42:42 GMT 2012 |
Rank | 94 | Aligned Residues | 64 |
% Identity | 28% | Template | d2c42a5 |
SCOP info | Ferredoxin-like
| 4Fe-4S ferredoxins
| Ferredoxin domains from multidomain proteins
|
Resolution | 1.78 |
|
 |
  |   |
336 | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | |
|
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |
|  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
| . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
Query Sequence |   |
Y | P | R | I | N | L | D | K | C | V | G | C | G | R | C | Y | I | S | C | Y | D | G | G | H | Q | A | M | E | W | S | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | T | R | T | P | H | C | N | T | E | K | C | V | G | C | L | L | C | G | H | V | C | P | V | G | . |
. |
Query Conservation |   |
  |   |   |
|   |   |   |   |
|   |   |
|
|   |
|   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
|   |   |   |   |
|   |
|
|
|
|
|   |   |   |
|
|   |   | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
Template Conservation |   |
  |
|   |   |
|   |
|   |
|
|   |
|
|   |
|   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|
|
|   |
|   |   |   |
|
|   |   |   |   |
Template Sequence |   |
V | P | Q | W | V | P | E | N | C | I | Q | C | N | Q | C | A | F | V | C | P | H | S | A | I | L | P | V | L | A | K | E | E | E | L | V | G | A | P | A | N | F | T | A | L | E | A | K | G | K | E | L | K | G | Y | K | F | R | I | Q | I | N | T | L | D | C | M | G | C | G | N | C | A | D | I | C | P | P | K | E | K |
Template Known Secondary structure |   |
 |  |  |  |
| T | T | T |
|
|
|
|
|  |  |  |  |  |
| S | S |
|
|  |  |  |  |  |  |
| G | G | G | G | T | T |
|
| T | T |
|
|
|  |  |
|
| S | G | G | G | T | T |
|  |  |  |  |  |  |
| T | T | T |
|
|
|
|
|  |  |  |  |  |
| S | S | S | S |
|
Template Predicted Secondary structure |   |
|
|  |  |
|  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
681 | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 |
  |
  |   |
392 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
C | I | E | L | G | E | V | K |
Query Conservation |   |
  |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |   |   |   |
Template Sequence |   |
A | L | V | M | Q | P | L | D |
Template Known Secondary structure |   |
S |  |  |  |  |  | G | G |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
761 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|