Job Description P25889 Confidence 99.56% Date Thu Jan 5 11:42:42 GMT 2012 Rank 70 Aligned Residues 237 % Identity 15% Template d1vjia_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 2.00

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.							.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.															.	.
Query SS confidence																				.	.	.	.	.	.															.	.
Query Sequence		I	T	F	C	G	V	K	F	P	N	P	F	C	L	S	S	S	P	.	.	.	.	.	.	V	G	N	C	Y	E	M	C	A	K	A	Y	D	T	.	.	G	W	G	G	V	V	F	K	T	I	G	F	F	I	A	N	E	V	S	P	R	F	D	H	L	V	K	E	D	T	G	F	I	G	F	K	N	M	E	Q
Query Conservation																				.	.	.	.	.	.															.	.
Alig confidence																				.	.	.	.	.	.															.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	K	M	G	R	F	N	L	S	H	R	V	V	L	A	P	L	T	R	Q	R	S	Y	G	N	V	P	Q	P	H	A	A	I	Y	Y	S	Q	R	T	T	P	G	G	F	L	I	T	E	A	T	G	V	S	D	T	A	Q	G	Y	Q	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	P	G	I
Template Known Secondary structure					T	T				S		S											S	G	G	G													T			T	T						S				S	S	T	T				S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			B
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.																.	.	.	80
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	A	E	H	P	L	E	E	N	L	A	A	L	R	R	L	K	E	D	Y	P	D	K	V	L	I	A	S	I	M	G	E	N	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	T	K	E	H	V	E	A	W	K	P	I	V	D	A	V	H	A	K	G	G	I	F	F	C	Q	I	W	H	V	G	R	V	S	N	S	G	F	Q	P	N	G	K	A	P	I	S	C	S	D	K	P	L	M	P	Q	I	R	S	N	G	I	D	E	A	L	F	T	P	P	R	R	L	G	I	E	E	I	P	G
Template Known Secondary structure		S	S																	T	T											T	T	S	S		G	G	G	S	G	G	G						S	S				S		T	T		B		S	S	S	S	S	B	S	S								G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
				114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.												.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																								.	.	.	.	.	.	.	.	.	.	.																																.											.	.
Query SS confidence		.	.																								.	.	.	.	.	.	.	.	.	.	.																																.											.	.
Query Sequence		.	.	Q	Q	W	E	E	L	A	R	L	V	Q	E	A	G	A	D	M	I	E	C	N	F	S	.	.	.	.	.	.	.	.	.	.	.	C	P	Q	M	T	S	H	A	M	G	S	D	V	G	Q	S	P	E	L	V	E	K	Y	C	R	A	V	K	R	G	S	.	T	L	P	M	L	A	K	M	T	P	.	.
Query Conservation		.	.																								.	.	.	.	.	.	.	.	.	.	.																																.											.	.
Alig confidence		.	.																								.	.	.	.	.	.	.	.	.	.	.																																.											.	.
Template Conservation
Template Sequence		I	V	N	D	F	R	L	A	A	R	N	A	M	E	A	G	F	D	G	V	E	I	H	G	A	N	G	Y	L	I	D	Q	F	M	K	D	T	V	N	D	R	T	D	E	Y	G	G	S	L	Q	N	R	C	K	F	P	L	E	I	V	D	A	V	A	K	E	I	G	P	D	R	V	G	I	R	L	S	P	F	A
Template Known Secondary structure																	T		S								T	T	S								T	T	T					S	T	T	S	S	S																					G	G	G							T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
											178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	N	I	G	D	M	C	E	V	A	L	A	A	K	R	G	G	A	D	G	I	A	A	I	N	T	V	K	S	I	T	N	I	D	L	N	Q	K	I	G	M	P	I	V	N	G	K	S	S	I	S	G	Y	S	G	K	A	V	K	P	I	A	L	R	F	I	Q	Q	M	R	T	H
Query Conservation		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	Y	M	E	S	G	D	T	N	P	G	A	L	G	L	Y	M	A	E	S	L	N	K	Y	G	I	L	Y	C	H	V	I	E	A	R	M	H	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	M	P	M	R	K	A
Template Known Secondary structure			T	T	T				S	S												T	T	T	T	T		S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.																																				.	280	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.		.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		P	E	L	R	D	F	P	I	S	G	I	G	G	I	E	T	W	E	D	A	A	E	F	L	L	L	G	.	A	A	T	L	Q	V	T	T	G	I	M	Q	Y	G	Y	R	I	V	E	D	M	A	S	G
Query Conservation																													.
Alig confidence		.	.	.												.													.													.
Template Conservation		.	.	.												.																										.
Template Sequence		.	.	.	F	K	G	T	F	I	S	A	G	G	F	.	T	R	E	D	G	N	E	A	V	S	K	G	R	T	D	L	V	A	Y	G	R	W	F	L	A	.	N	P	D	L	P	K	R	F	Q	V	D
Template Known Secondary structure		.	.	.			S						S	S		.											T	T	S		S					S						.		T	T								T
Template Predicted Secondary structure		.	.	.												.																										.
Template SS confidence
					296	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.		.	.	.	.	.	.	.	.	340	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions