Job Description P25889 Confidence 99.98% Date Thu Jan 5 11:42:42 GMT 2012 Rank 15 Aligned Residues 261 % Identity 21% Template d1vcfa1 SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 2.60

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.				30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																											.	.	.
Query SS confidence																											.	.	.
Query Sequence		D	L	S	I	T	F	C	G	V	K	F	P	N	P	F	C	L	S	S	S	P	V	G	N	C	.	.	.	Y	E	M	C	A	K	A	Y	D	T	G	W	G	G	V	V	F	K	T	I	G	F	F	I	A	N	E	V	S	P	R	F	D	H	L	V	K	E	D	T	G	F	I	G	F	K	N	M	E	Q	I	A
Query Conservation																											.	.	.
Alig confidence																											.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	L	T	T	P	F	L	G	K	T	L	K	A	P	F	L	I	G	A	X	T	E	N	G	E	R	I	N	L	A	L	A	E	A	A	E	A	L	G	V	G	X	X	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	G	R
Template Known Secondary structure								T	T				S	S	S																									T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90																																	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.
Query SS confidence																																				.	.
Query Sequence		E	H	P	L	E	E	N	L	A	A	L	R	R	L	K	E	D	Y	P	D	K	V	L	I	A	S	I	M	G	E	N	E	Q	Q	.	.	W	E	E	L	A	R	L	V	Q	E	A	G	A	D	M	I	E	C	N	F	S	C	P	Q	M	T	S	H	A	M	G	S	D	V	G	Q	S	P	E	L	V	E	K	Y
Query Conservation																																				.	.
Alig confidence																																				.	.																																.	.	.	.
Template Conservation																																																																					.	.	.	.
Template Sequence		I	L	L	E	R	P	E	A	L	R	S	F	R	V	R	K	V	A	P	K	A	L	L	I	A	N	L	G	L	A	Q	L	R	R	Y	G	R	D	D	L	L	R	L	V	E	X	L	E	A	D	A	L	A	F	H	V	N	P	L	Q	E	A	V	Q	R	G	D	.	.	.	.	T	D	F	R	G	L	V	E	R
Template Known Secondary structure							T	T	T							T	T	T		S	S	S								G	G	G	G	G	T														T		S														T	T	S		.	.	.	.				T	T
Template Predicted Secondary structure																																																																					.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.					.	.	.	.	.	170	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	R	A	V	K	R	G	S	T	L	P	M	L	A	K	M	T	P	N	I	G	D	M	C	E	V	A	L	A	A	K	R	G	G	A	D	G	I	A	A	I	N	T	V	K	S	I	T	N	I	D	L	N	Q	K	I	G	M	P	I	V	N	G	K	S	S	I	S	G	Y	S	G	K	A	V	K	P	I	A	L
Query Conservation
Alig confidence								.																.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.																.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	E	L	L	P	.	L	P	F	P	V	X	V	K	E	V	G	H	G	L	S	.	R	E	A	A	L	A	L	R	D	L	P	L	A	A	V	D	V	A	G	A	G	G	T	S	W	A	R	V	E	E	W	V	E	L	C	E	I	G	I	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A
Template Known Secondary structure							S	.		S	S							S	S	S				.								T	T	S			S							B	T	S									T				T	T		S		B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure								.																.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		174	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.																.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.				.	.	290	.					.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																																																		.	.	.					.	.	.	.
Query SS confidence																																																		.	.	.					.	.	.	.
Query Sequence		R	F	I	Q	Q	M	R	T	H	P	E	L	R	D	F	P	I	S	G	I	G	G	I	E	T	W	E	D	A	A	E	F	L	L	L	G	A	A	T	L	Q	V	T	T	G	I	M	Q	.	.	.	Y	G	Y	R	.	.	.	.	I	V	E	D	M	A	S	G	L	S	H	Y	L	A	D	Q	G	F	D	S	L
Query Conservation																																																		.	.	.					.	.	.	.
Alig confidence												.	.																																					.	.	.					.	.	.	.
Template Conservation												.	.
Template Sequence		R	A	I	L	E	V	R	E	V	L	.	.	P	H	L	P	L	V	A	S	G	G	V	Y	T	G	T	D	G	A	K	A	L	A	L	G	A	D	L	L	A	V	A	R	P	L	L	R	P	A	L	E	G	A	E	R	V	A	A	W	I	G	D	Y	L	E	E	L	R	T	A	L	F	A	I	G	A	R	N	P
Template Known Secondary structure												.	.	S	S	S						S	S			S											T		S						G	G	G					T	T																								T		S	S	G
Template Predicted Secondary structure												.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.			.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		313	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	M	V	G	L	A	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	E	A	R	G	R	V	E
Template Known Secondary structure		G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions