Job Description P25889 Confidence 96.72% Date Thu Jan 5 11:42:42 GMT 2012 Rank 267 Aligned Residues 161 % Identity 14% Template d1geha1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 2.80

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.					.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.				.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.																								.	.	.
Query SS confidence																	.	.	.	.																								.	.	.
Query Sequence		R	L	K	E	D	Y	P	D	K	V	L	I	A	S	I	.	.	.	.	M	G	E	N	E	Q	Q	W	E	E	L	A	R	L	V	Q	E	A	G	A	D	M	I	.	.	.	E	C	N	F	S	C	P	Q	M	T	S	H	A	M	G	S	D	V	G	Q	S	P	E	L	V	E	K	Y	C	R	A	V	K	R	G
Query Conservation																	.	.	.	.																								.	.	.
Alig confidence																	.	.	.	.																								.	.	.											.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.
Template Sequence		R	K	M	L	E	I	K	D	R	P	I	Y	G	V	V	P	K	P	K	V	G	Y	S	P	E	E	F	E	K	L	A	Y	D	L	L	S	N	G	A	D	Y	M	K	D	D	E	N	L	T	S	P	W	Y	N	R	.	.	.	.	.	.	.	F	E	E	R	A	E	I	M	A	K	I	I	D	K	V	E	N	E
Template Known Secondary structure						T			S	S								S	S		S	S																T	T								T	T					T	T	S		.	.	.	.	.	.	.
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.								.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		167	.	.	170	.	.			.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.				.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure								.	.																												.																		.	.	.
Query SS confidence								.	.																												.																		.	.	.
Query Sequence		S	T	L	P	M	L	.	.	A	K	M	T	P	N	I	G	D	M	C	E	V	A	L	A	A	K	R	G	G	A	D	G	I	A	A	.	I	N	T	V	K	S	I	T	N	I	D	L	N	Q	K	I	G	.	.	.	M	P	I	V	N	G	K	S	S	I	S	G	Y	S	G	K	A	V	K	P	I	A	L	R
Query Conservation								.	.																												.																		.	.	.
Alig confidence								.	.																												.																		.	.	.
Template Conservation
Template Sequence		T	G	E	K	K	T	W	F	A	N	I	T	A	D	L	L	E	M	E	Q	R	L	E	V	L	A	D	L	G	L	K	H	A	M	V	D	V	V	I	T	G	W	G	A	L	R	Y	I	R	D	L	A	A	D	Y	G	L	A	I	H	G	H	R	A	M	H	A	A	F	T	R	N	P	Y	H	G	I	S	M	F
Template Known Secondary structure		T		S							B			S	S															T																										T	T								T	T	G	G	G	T	S	S		T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	Q	Q	M	R	T	H	P	E	L	R	D	F	P	I	S	G	I	G	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	A	K	L	Y	R	L	I	G	I	D	Q	L	H	V	G	T	A	E	G
Template Known Secondary structure											T		S									T
Template Predicted Secondary structure
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions