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Job DescriptionP25889
Confidence100.00%DateThu Jan 5 11:42:42 GMT 2012
Rank12Aligned Residues304
% Identity25%Templated1ep3a_
SCOP infoTIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.... .....60.........70.........80.
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Query Sequence  TKDLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIA. NEVSPRFDHLVKEDTGFIGFKNMEQIA
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Template Sequence  NNRLSVKLPGLDLKNPIIPASGCFGFGEEYAKYYDLNKLGSIMVKATTLHPRFGNPTPRVAETASGMLNAIGLQNPGL. .
Template Known Secondary structure 
TTT
TTSSS
TTSSTTSTTGGGTS
GGGSS

SS
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S

TT




B

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   4.....10.........20.........30.........40.........50.........60.........70.........80.
 
   82.......90.........100.........110.........120..... ....130.........140.........150.........160
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Query Sequence  EHPLEENLAALRRLKEDYPDKVLIASIMGENEQQWEELARLVQE. AGADMIECNFSCPQMTSHAMGSDVGQSPELVEKYC
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Template Sequence  . . . EVIMTEKLPWLNENFPELPIIANVAGSEEADYVAVCAKIGDAANVKAIELNISCPNVKH. . GGQAFGTDPEVAAALV
Template Known Secondary structure  ...T
TTS


SSTTSTT

SGGG..TTGGG
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   82.......90.........100.........110.........120.........130.........140 .........150......
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVKPIALR
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Template Sequence  KACKAVSKVPLYVKLSPNVTDIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANIT. . . . . GGLSGPAIKPVALK
Template Known Secondary structure 
SS

S
SS
STT
S




B
TTT
SBSSTTS
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   157..160.........170.........180.........190.........200.........210....... ..220.........230.
 
   241........250.........260.........270.........280.........290.........300.........310.........320
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Query Sequence  FIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMASGLSHYLADQGFDSLQEMVGLAN
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Template Sequence  LIHQVAQD. . . VDIPIIGMGGVANAQDVLEMYMAGASAVAVGTANFA. DPFVCPKIIDKLPELMDQYRIESLESLIQEVK
Template Known Secondary structure  TT...
SS

SS

ST
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TTTT
S
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   232....... 240.........250.........260.........270..... ....280.........290.........300.......
 
   321.
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Query Sequence  NN
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Template Sequence  EG
Template Known Secondary structure  S
Template Predicted Secondary structure 

Template SS confidence 

   308.
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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