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Job DescriptionP25889
Confidence95.07%DateThu Jan 5 11:42:42 GMT 2012
Rank321Aligned Residues180
% Identity12%Templated1eixa_
SCOP infoTIM beta/alpha-barrel Ribulose-phoshate binding barrel Decarboxylase
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   101........110.........120.........130.........140.........150.........160.........170.. ......
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Query Sequence  DKVLIASIMGENEQQWEELARLVQEAGADMIECNFSCPQMTSHAMGSDVGQSPELVEKYCRAVKRGSTLPML. . AKMTPN
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Template Sequence  NSPVVVALDYHNRDDALAFVDKIDPR. DCRLKVG. . . . . . . . . . . . . . KEMFTLFGPQFVRELQQ. RGFDIFLDLKFHDI
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SSTTS
TT.T
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S
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   14.....20.........30......... 40...... ...50.........60... ......70.......
 
   179180.........190.........200....... ..210.........220...
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Query Sequence  IGDMCEVALAAKRGGADGIAAINTVKSIT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NIDLNQKIGMPIVNGK
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Template Sequence  PNTAAHAVAAAADLGVWMVNVHASGGARMMTAAREALVPFGKDAPLLIAVTVLTSMEASDLVDLGMTLSPADYAERLAAL
Template Known Secondary structure  T
SBGGG
TTGGGGGG


S
TT

TTT

S
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   78.80.........90.........100.........110.........120.........130.........140.........150.......
 
   224.....230.........240.........250.........260...... ...270.........280....... ..290 .
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Query Sequence  SSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWE. . . . . . . . . . DAAEFLLLGAATLQVTTGIMQ. YGY. R
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Template Sequence  TQKCGLDGVVCSAQEAVRFKQVF. . . . . GQEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQSVDPAQ
Template Known Secondary structure  TT
S

GGG.....
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B

TT


TT

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B
TT
S
TSSS
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   158.160.........170.........180 .........190.........200.........210.........220.........230..
 
   292.......300.
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Query Sequence  IVEDMASGLS
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Template Sequence  TLKAINASLQ
Template Known Secondary structure  T
Template Predicted Secondary structure 

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   233......240..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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