Job Description P25889 Confidence 99.12% Date Thu Jan 5 11:42:42 GMT 2012 Rank 104 Aligned Residues 202 % Identity 19% Template c3thaB_ PDB info PDB header:lyase Chain: B: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: tryptophan synthase subunit alpha from campylobacter jejuni. Resolution 2.37 Å

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		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.							.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																											.	.											.	.	.	.	.	.
Query SS confidence																																											.	.											.	.	.	.	.	.
Query Sequence		R	L	K	E	D	Y	P	D	K	V	L	I	A	S	I	M	G	E	N	E	Q	Q	W	E	E	L	A	R	L	V	Q	E	A	G	A	D	M	I	E	C	N	.	.	F	S	C	P	Q	M	T	S	H	A	.	.	.	.	.	.	M	G	S	D	V	G	Q	S	P	E	L	V	E	K	Y	C	R	A	V	K	R
Query Conservation																																											.	.											.	.	.	.	.	.
Alig confidence																																											.	.											.	.	.	.	.	.
Template Conservation
Template Sequence		R	K	F	Y	K	E	N	A	N	V	A	Y	T	V	L	G	Y	P	N	L	Q	T	S	E	A	F	L	Q	R	L	D	Q	S	P	I	D	I	L	E	L	G	V	A	Y	S	D	P	I	A	D	G	E	I	I	A	D	A	A	K	I	A	L	D	Q	G	V	D	I	H	S	V	F	E	L	L	A	R	I	K	T
Template Known Secondary structure		G	G	S		S	S	S								T	T	S	S											T	G	G	G	S	S		S								S	S					S	S													T	T												T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.																												200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	S	T	L	P	M	L	A	K	M	T	P	N	I	G	.	D	M	C	E	V	A	L	A	A	K	R	G	G	A	D	G	I	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	N	T	V	K	S	I	T	N	I	D	L	N	Q	K	I	G	M
Query Conservation																	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	K	A	L	V	F	X	V	Y	Y	N	L	I	F	S	Y	G	L	E	K	F	V	K	K	A	K	S	L	G	I	C	A	L	I	V	P	E	L	S	F	E	E	S	D	D	L	I	K	E	C	E	R	Y	N	I	A	L	I	T	L	V	S	V	T	T	P	K	E	R	V	K	K	L	V	K	H	A	K	G	F
Template Known Secondary structure		S	S																										T	T							T	T			G	G	G												T									T	T	S										T	T			S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.					.	.	290	.	.	.
Predicted Secondary structure																																																																								.	.	.	.
Query SS confidence																																																																								.	.	.	.
Query Sequence		P	I	V	N	G	K	S	S	I	S	G	Y	S	G	K	A	V	K	P	I	A	L	R	F	I	Q	Q	M	R	T	H	P	E	L	R	D	F	P	I	S	G	I	G	G	I	E	T	W	E	D	A	A	E	F	L	L	L	G	A	A	T	L	Q	V	T	T	G	I	M	Q	.	.	.	.	Y	G	Y	R	I	V
Query Conservation																																																																								.	.	.	.
Alig confidence													.																				.	.	.																		.																			.	.	.	.
Template Conservation													.																				.	.	.																		.
Template Sequence		I	Y	L	L	A	S	I	G	I	T	G	.	T	K	S	V	E	E	A	I	L	Q	D	K	V	K	E	I	R	S	F	.	.	.	T	N	L	P	I	F	V	G	F	G	I	Q	N	N	Q	D	V	.	K	R	X	R	K	V	A	D	G	V	I	V	G	T	S	I	V	K	C	F	K	Q	G	N	L	D	I	I
Template Known Secondary structure								S		S	S		.																		T	T	.	.	.			S						S	S			S	S				.				T	T	T	S	S												T	T	S	S
Template Predicted Secondary structure													.																				.	.	.																		.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.				.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		294	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	M	A	S	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	K	D	I	E	E	I
Template Known Secondary structure								T
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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