Job Description P25889 Confidence 97.00% Date Thu Jan 5 11:42:42 GMT 2012 Rank 244 Aligned Residues 207 % Identity 17% Template c3sz8D_ PDB info PDB header:transferase Chain: D: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase 2; PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from2 burkholderia pseudomallei Resolution 2.05 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	C	A	K	A	Y	D	T	G	W	G	G	V	V	F	K	T	I	G	F	F	I	A	N	E	V	S	P	R	F	D	H	L	V	K	E	D	T	G	F	I	G	F	K	N	M	E	Q	I	A	E	H	P	L	E	E	N	L	A	A	L	R	R	L	K	E	D	Y	P	D	K	V	L	I	A	S	I	M	G
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Sequence		E	Y	V	A	V	T	R	K	L	G	I	P	F	V	F	K	A	S	F	D	K	A	N	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	I	H	S	Y	R	G	V	G	L	D	E	G	L	K	I	F	A	E	V	K	A	R	F	.	G	V	P	V	I	T	D	V	H	E
Template Known Secondary structure											T									S			T	T		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T	S				S																	.										S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.																					.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.
Query SS confidence																																																																					.	.
Query Sequence		E	N	E	Q	Q	W	E	E	L	A	R	L	V	Q	E	A	G	A	D	M	I	E	C	N	F	S	C	P	Q	M	T	S	H	A	M	G	S	D	V	G	Q	S	P	E	L	V	E	K	Y	C	R	A	V	K	R	G	S	T	L	P	M	L	A	K	M	T	P	.	.	N	I	G	D	M	C	E	V	A	L	A
Query Conservation																																																																					.	.
Alig confidence		.	.	.	.	.	.											.						.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.												.	.
Template Conservation		.	.	.	.	.	.											.						.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Template Sequence		.	.	.	.	.	.	A	E	Q	A	A	P	V	A	E	I	.	A	D	V	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	V	P	A	F	L	A	R	Q	T	D	L	V	V	A	I	A	K	.	.	.	.	.	A	G	K	P	V	N	V	K	K	P	Q	F	M	S	P	T	Q	L	K	H	V	V	S	K
Template Known Secondary structure		.	.	.	.	.	.	G	G	G								.		S				.	.	.	.	.	.	.	.	.	.	.	.			G	G	G	T	T											.	.	.	.	.	T		S								T	T	S		T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.											.						.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Template SS confidence
								97	.	.	100	.	.	.	.	.	.		.	.	.	110	.													.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.						.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.			.	260	.	.	.	.	.	.
Predicted Secondary structure																																																																								.	.
Query SS confidence																																																																								.	.
Query Sequence		A	K	R	G	G	A	D	G	I	A	A	I	N	T	V	K	S	I	T	N	I	D	L	N	Q	K	I	G	M	P	I	V	N	G	K	S	S	I	S	G	Y	S	G	K	A	V	K	P	I	A	L	R	F	I	Q	Q	M	R	T	H	P	E	L	R	D	F	P	I	S	G	.	.	I	G	G	I	E	T	W	E
Query Conservation																																																																								.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.								.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template Sequence		C	G	E	V	G	N	D	R	V	M	L	C	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	S	F	G	Y	D	N	L	V	V	D	M	L	G	F	R	Q	M	A	E	T	T	.	.	G	G	C	P	V	I	F	D	V	T	H	S	L	Q	V	L	D
Template Known Secondary structure					T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S	S						T	T								T	T	.	.	T	S							T	T	T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.																									.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.											.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	A	A	E	F	L	L	L	G	A	A	T	L	Q	V	.	.	.	.	.	.	.	.	.	.	T	T	G	I	M	Q	Y	G	Y	R	I	V	E	D	M	A	S	G	L	S	H	Y	L	A	D	Q	G
Query Conservation																	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	R	A	G	I	A	V	G	I	A	G	L	F	L	E	A	H	P	D	P	D	R	A	R	P	S	A	L	P	L	H	Q	L	E	G	L	L	S	Q	M	K	A	I	D	D	L	V	K	R	M	P
Template Known Secondary structure												S								S		S	T	T								G	G	G																T	T
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions