Job Description P25889 Confidence 99.27% Date Thu Jan 5 11:42:42 GMT 2012 Rank 89 Aligned Residues 216 % Identity 16% Template c3navB_ PDB info PDB header:lyase Chain: B: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: crystal structure of an alpha subunit of tryptophan synthase from2 vibrio cholerae o1 biovar el tor str. n16961 Resolution 2.10 Å

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		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.							.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.											.	.	.	.	.	.
Query SS confidence																																																				.	.											.	.	.	.	.	.
Query Sequence		L	E	E	N	L	A	A	L	R	R	L	K	E	D	Y	P	D	K	V	L	I	A	S	I	M	G	E	N	E	Q	Q	W	E	E	L	A	R	L	V	Q	E	A	G	A	D	M	I	E	C	N	.	.	F	S	C	P	Q	M	T	S	H	A	.	.	.	.	.	.	M	G	S	D	V	G	Q	S	P	E	L	V
Query Conservation																																																				.	.											.	.	.	.	.	.
Alig confidence															.	.																																				.	.											.	.	.	.	.	.
Template Conservation															.	.
Template Sequence		Y	Q	A	L	F	Q	R	L	S	A	A	Q	Q	.	.	G	A	F	V	P	F	V	T	I	G	D	P	N	P	E	Q	S	L	A	I	M	Q	T	L	I	D	A	G	A	D	A	L	E	L	G	M	P	F	S	D	P	L	A	D	G	P	T	I	Q	G	A	N	L	R	A	L	A	A	K	T	T	P	D	I	C
Template Known Secondary structure													T	B	.	.									T	T	S	S															T	T		S	S										T	T																T	T
Template Predicted Secondary structure															.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.			.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		157	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180				.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.																	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure										.																	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.																	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	K	Y	C	R	A	V	K	.	R	G	S	T	L	P	M	L	A	K	M	T	P	N	I	G	.	.	.	D	M	C	E	V	A	L	A	A	K	R	G	G	A	D	G	I	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	N	T	V	K	S	I	T	N	I	D	L	N	Q	K	I	G
Query Conservation										.																	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.																	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	E	L	I	A	Q	I	R	A	R	N	P	E	T	P	I	G	L	L	M	Y	A	N	L	V	Y	A	R	G	I	D	D	F	Y	Q	R	C	Q	K	A	G	V	D	S	V	L	I	A	D	V	P	T	N	E	S	Q	P	F	V	A	A	A	E	K	F	G	I	Q	P	I	F	I	A	P	P	T	A	S	D	E
Template Known Secondary structure													T	T	S													T	T													T							T	T	S		G	G	G											T	T									T	T			S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.				.	290	.	.	.
Predicted Secondary structure																																																																										.	.	.
Query SS confidence																																																																										.	.	.
Query Sequence		M	P	I	V	N	G	K	S	S	I	S	G	Y	S	G	K	A	V	K	P	I	A	L	R	F	I	Q	Q	M	R	T	H	P	E	L	R	D	F	P	I	S	G	I	G	G	I	E	T	W	E	D	A	A	E	F	L	L	L	G	A	A	T	L	Q	V	T	T	G	I	M	Q	Y	.	.	.	G	Y	R	I	V
Query Conservation																																																																										.	.	.
Alig confidence																								.										.	.	.																																						.	.	.
Template Conservation																								.										.	.	.
Template Sequence		T	L	R	A	V	A	Q	L	G	K	G	Y	T	Y	L	L	S	R	A	P	V	H	.	A	L	L	E	R	L	Q	Q	F	.	.	.	D	A	P	P	A	L	L	G	F	G	I	S	E	P	A	Q	V	K	Q	A	I	E	A	G	A	A	G	A	I	S	G	S	A	V	V	K	I	I	E	T	H	L	D	N	P
Template Known Secondary structure												S												.									T	.	.	.	T								S	S			S										T	T		S					S	S									T	T	T
Template Predicted Secondary structure																								.										.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.				.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		294	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	M	A	S	G	L	S	H	Y	L	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	Q	L	T	E	L	A	N	F	T	Q	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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