Job Description P25889 Confidence 96.19% Date Thu Jan 5 11:42:42 GMT 2012 Rank 290 Aligned Residues 213 % Identity 12% Template c3m6yA_ PDB info PDB header:lyase Chain: A: PDB Molecule:4-hydroxy-2-oxoglutarate aldolase; PDBTitle: structure of 4-hydroxy-2-oxoglutarate aldolase from bacillus cereus at2 1.45 a resolution. Resolution 1.45 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	N	C	Y	E	M	C	A	K	A	Y	D	T	G	W	G	G	V	V	F	K	T	I	G	F	F	I	A	N	E	V	S	P	R	F	D	H	L	V	K	E	D	T	G	F	I	G	F	K	N	M	E	Q	I	A	E	H	P	L	E	E	N	L	A	A	L	R	R	L	K	E	D	Y	P	D	K	V	L	I
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Sequence		L	A	N	N	I	E	N	A	K	D	I	F	E	A	A	E	G	Y	V	V	V	G	V	L	S	K	D	Y	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	E	E	A	V	T	A	X	K	A	Y	G	K	E	I	D	D	A	.	V	S
Template Known Secondary structure				S	S											T	T	T								G	G	G	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S															T	T	T		.
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.																														.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.	.
Query Sequence		A	S	I	M	G	E	N	E	Q	Q	W	E	E	L	A	R	L	V	Q	E	A	G	A	D	M	I	E	C	N	F	S	C	P	Q	M	T	S	H	A	M	G	S	D	V	G	Q	S	P	E	L	V	E	K	Y	C	R	A	V	K	R	G	S	T	L	P	M	L	A	K	M	T	P	N	.	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.	.
Alig confidence																										.	.	.	.																							.	.	.	.																				.	.	.	.	.	.	.
Template Conservation																										.	.	.	.																							.	.	.	.
Template Sequence		I	G	L	G	A	G	D	N	R	Q	A	A	V	V	A	E	I	A	K	H	Y	P	G	S	.	.	.	.	H	I	N	Q	V	F	P	S	V	G	A	T	R	A	N	L	G	E	K	D	S	W	.	.	.	.	I	N	S	L	V	S	P	T	G	K	V	G	Y	V	N	I	S	T	G	P	I	S	A	A	G	E
Template Known Secondary structure						T	T		G	G	G								T	T	T				S	.	.	.	.					B	G	G	G									T	T					.	.	.	.						B			S	S	T	T							S	T	T	G	G	G	S	S
Template Predicted Secondary structure																										.	.	.	.																							.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.					.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.					.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
					179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	I	G	D	M	C	E	V	A	L	A	A	K	R	G	G	A	D	G	I	A	A	I	N	T	V	K	S	I	T	N	I	D	L	N	Q	K	I	G	M	P	I	V	N	G	K	S	S	I	S	G	Y	S	G	K	A	V	K	P	I	A	L	R	F	I	Q	Q	M	R	T	H	P	E	L	R	D	F	P
Query Conservation		.	.	.
Alig confidence		.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	K	A	I	V	P	I	K	T	A	I	A	L	V	R	D	X	G	G	N	S	L	K	Y	F	P	X	K	G	L	A	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	E	Y	R	A	V	A	K	A	C	A	E	E	G	F	A
Template Known Secondary structure		S																	T										T	T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.																																.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270					.	.	.	.	.	.	.	.	.	280			.	.	.	.	.	.	.	.	.						290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.											.	.										.	.	.	.	.
Query SS confidence																	.	.	.	.											.	.										.	.	.	.	.
Query Sequence		I	S	G	I	G	G	I	E	T	W	E	D	A	A	E	.	.	.	.	F	L	L	L	G	A	A	T	L	Q	.	.	V	T	T	G	I	M	Q	Y	G	.	.	.	.	.	Y	R	I	V	E	D	M	A	S	G	L	S	H	Y	L	A	D	Q	G
Query Conservation																	.	.	.	.											.	.										.	.	.	.	.
Alig confidence									.								.	.	.	.											.	.										.	.	.	.	.
Template Conservation									.
Template Sequence		L	E	P	T	G	G	I	.	D	K	E	N	F	E	T	I	V	R	I	A	L	E	A	N	V	E	Q	V	I	P	H	V	Y	S	S	I	I	D	K	E	T	G	N	T	K	V	E	A	V	R	E	L	L	A	V	V	K	K	L	V	D	Q	Y	A
Template Known Secondary structure					B	S	S		.		T	T	T											T	T		S		B						G	G	G	B		T	T	T			B																	T	T
Template Predicted Secondary structure									.
Template SS confidence
		189	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions