Job Description P25889 Confidence 99.67% Date Thu Jan 5 11:42:42 GMT 2012 Rank 64 Aligned Residues 253 % Identity 13% Template c3k30B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:histamine dehydrogenase; PDBTitle: histamine dehydrogenase from nocardiodes simplex Resolution 2.70 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.								.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																			.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.
Query Sequence		T	F	C	G	V	K	F	P	N	P	F	C	L	S	S	S	P	.	.	.	.	.	.	.	V	G	N	C	Y	E	M	C	A	K	A	Y	D	T	G	W	G	G	V	V	F	K	T	I	G	F	F	I	A	N	E	V	S	P	R	F	D	H	L	V	K	E	D	T	G	F	I	G	F	K	N	M	E	Q	I	A
Query Conservation																			.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	I	G	P	F	T	T	K	N	R	F	Y	Q	V	P	H	C	N	G	M	G	Y	R	D	P	S	A	Q	A	S	M	R	K	I	K	A	E	G	G	W	S	A	V	C	T	E	Q	V	E	I	H	A	T	S	D	I	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	I	E	L	R	I	W	D
Template Known Secondary structure				T	T				S	S	S									S		S	S	S															T	T		S										S	G	G	G			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S						S	S
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.															.	.	.	80	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.																																								.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	H	P	L	E	E	N	L	A	A	L	R	R	L	K	E	D	Y	P	D	K	V	L	I	A	S	I	M	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	E	Q	Q	W	E	E	L	A	R	L
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	Q	D	L	P	A	L	K	R	I	A	D	A	I	H	E	G	G	G	L	A	G	I	E	L	A	H	N	G	M	N	A	P	N	Q	L	S	R	E	T	P	L	G	P	G	H	L	P	V	A	P	D	T	I	A	P	I	Q	A	R	A	M	T	K	Q	D	I	D	D	L	R	R	W	H	R	N	A	V	R	R
Template Known Secondary structure		G	G	G															T											G	G	G				T	T	T							S	S	S					S	S				S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140													.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.			.	.	170	.	.	.	.	.	.	.	.									.	180
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.																												.	.												.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.																												.	.												.	.	.	.	.	.	.	.
Query Sequence		V	Q	E	A	G	A	D	M	I	E	C	N	F	S	C	P	Q	M	.	.	.	.	.	.	.	.	.	.	.	.	T	S	H	A	M	G	S	D	V	G	Q	S	P	E	L	V	E	K	Y	C	R	A	V	K	R	G	S	.	.	T	L	P	M	L	A	K	M	T	P	N	.	.	.	.	.	.	.	.	I	G
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.																												.	.												.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.																												.	.												.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	I	E	A	G	Y	D	I	V	Y	V	Y	G	A	H	G	Y	S	G	V	H	H	F	L	S	K	R	Y	N	Q	R	T	D	E	Y	G	G	S	L	E	N	R	M	R	L	L	R	E	L	L	E	D	T	L	D	E	C	A	G	R	A	A	V	A	C	R	I	T	V	E	E	E	I	D	G	G	I	T	R	E
Template Known Secondary structure						T		S								T	T		S								T	T	T					S	T	T	S	S	S					T															S	S	S	S								S				S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		D	M	C	E	V	A	L	A	A	K	R	G	G	A	D	G	I	A	A	I	N	T	V	K	S	I	T	N	I	D	L	N	Q	K	I	G	M	P	I	V	N	G	K	S	S	I	S	G	Y	S	G	K	A	V	K	P	I	A	L	R	F	I	Q	Q	M	R	T	H	P	E	L	R	D	F	P	I	S	G	I	G
Query Conservation
Alig confidence													.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Template Conservation													.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Template Sequence		D	I	E	G	V	L	R	E	L	G	E	.	L	P	D	L	W	D	F	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	G	S	W	E	G	D	S	V	T	S	R	F	A	P	E	G	R	Q	E	E	F	V	A	G	L	K	K	L	.	.	.	T	T	K	P	V	V	G	V	G
Template Known Secondary structure											T	T	.	S	S	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S					S			T	T	T			T	T	T	T					T	T	T	G	G	G	.	.	.		S	S						S
Template Predicted Secondary structure													.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.																				.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.				.	.	.	.	.	.	.	300	.
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.		.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		G	I	E	T	W	E	D	A	A	E	F	L	L	L	G	.	A	A	T	L	Q	V	T	T	G	I	M	Q	Y	G	Y	R	I	V	E	D	M	A	S	G
Query Conservation																	.
Alig confidence																	.													.
Template Conservation																														.
Template Sequence		R	F	T	S	P	D	A	M	V	R	Q	I	K	A	G	I	L	D	L	I	G	A	A	R	P	S	I	A	.	D	P	F	L	P	N	K	I	R	D	G
Template Known Secondary structure															T	T	S		S					S						.		T	T								T
Template Predicted Secondary structure																														.
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.		330	.	.	.	.	.	.	.	.	.	340

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions