Job Description P25889 Confidence 49.39% Date Thu Jan 5 11:42:42 GMT 2012 Rank 478 Aligned Residues 259 % Identity 16% Template c3g8rA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:probable spore coat polysaccharide biosynthesis protein e; PDBTitle: crystal structure of putative spore coat polysaccharide biosynthesis2 protein e from chromobacterium violaceum atcc 12472 Resolution 2.49 Å

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		18	.	20	.	.	.							.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.						.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.																			.	.	.	.	.
Query SS confidence								.	.	.	.	.	.																			.	.	.	.	.
Query Sequence		P	F	C	L	S	S	.	.	.	.	.	.	S	P	V	G	N	C	Y	E	M	C	A	K	A	Y	D	T	G	W	.	.	.	.	.	G	G	V	V	F	K	T	I	G	F	F	I	A	N	E	V	S	P	R	F	D	H	L	V	K	E	D	T	G	F	I	G	F	K	N	M	E	Q	I	A	E	H	P	L	E
Query Conservation								.	.	.	.	.	.																			.	.	.	.	.
Alig confidence								.	.	.	.	.	.																			.	.	.	.	.																		.	.	.																			.	.	.	.	.
Template Conservation																																																						.	.	.																			.	.	.	.	.
Template Sequence		P	L	F	I	F	E	X	A	N	N	H	X	G	N	V	E	H	G	V	A	L	I	R	A	I	R	E	S	C	Q	G	F	D	F	D	F	G	F	K	L	Q	Y	R	N	L	D	T	F	I	H	S	S	.	.	.	F	K	G	R	D	D	V	K	Y	V	K	R	F	E	E	T	R	L	.	.	.	.	.	Q	P
Template Known Secondary structure									T	T	T	T	T	T		S														T	T	T			S															S		G	G	.	.	.	G	T	T			S	S	S	S							T			.	.	.	.	.
Template Predicted Secondary structure																																																						.	.	.																			.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.				.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.						.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	L	A	A	L	R	R	L	K	E	D	Y	P	D	K	V	L	I	A	S	I	M	G	E	N	E	Q	Q	W	E	E	L	A	R	L	V	Q	E	A	G	A	D	M	I	E	C	N	F	S	C	P	Q	M	T	S	H	A	M	G	S	D	V	G	Q	S	P	E	L	V	E	K	Y	C	R	A	V	K	R	G
Query Conservation
Alig confidence															.											.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Template Conservation															.											.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Template Sequence		E	Q	X	Q	K	L	V	A	E	X	K	A	N	.	G	F	K	A	I	C	T	P	F	D	.	.	.	.	.	.	E	E	S	V	D	L	I	E	A	H	G	I	E	I	I	K	.	.	.	.	.	.	.	.	.	.	.	.	I	A	S	C	S	F	T	D	W	P	L	L	E	R	I	A	R	.	.	.	.	.
Template Known Secondary structure														T	.	T									S	.	.	.	.	.	.										T	T						.	.	.	.	.	.	.	.	.	.	.	.			S	S	S	T	T										T	.	.	.	.	.
Template Predicted Secondary structure															.											.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100							.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.													.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		167	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure												.																								.
Query SS confidence												.																								.
Query Sequence		S	T	L	P	M	L	A	K	M	T	.	P	N	I	G	D	M	C	E	V	A	L	A	A	K	R	G	G	A	D	G	I	A	A	.	I	N	T	V	K	S	I	T	N	I	D	L	N	Q	K	I	G	M	P	I	V	N	G	K	S	S	I	S	G	Y	S	G	K	A	V	K	P	I	A	L	R	F	I	Q	Q
Query Conservation												.																								.
Alig confidence												.																								.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	D	K	P	V	V	A	S	T	A	G	A	R	R	E	D	I	D	K	V	V	S	F	X	L	H	R	G	K	D	L	T	I	X	H	C	V	A	E	Y	P	T	P	D	D	H	L	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	R	I	K	T
Template Known Secondary structure		S		S							T	T															T	T	T												S	S			G	G	G			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.																											.	.	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.				.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.			.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.																							.	.
Query SS confidence																							.	.	.																							.	.
Query Sequence		M	R	T	H	P	E	L	R	D	F	P	I	S	G	I	G	G	I	E	T	W	.	.	.	E	D	A	A	E	F	L	L	L	G	A	A	T	L	Q	V	T	T	G	I	M	Q	.	.	Y	G	Y	R	I	V	E	D	M	A	S	G	L	S	H	Y	L	A	D	Q	G	F	D	S	L	Q	E	M	V	G	L	A
Query Conservation																							.	.	.																							.	.
Alig confidence							.	.											.				.	.	.																							.	.																				.	.
Template Conservation							.	.											.																																																		.	.
Template Sequence		L	R	Q	Q	Y	.	.	A	G	V	R	I	G	Y	S	T	H	.	E	D	P	D	L	X	E	P	I	X	L	A	V	A	Q	G	A	T	V	F	E	K	H	V	G	L	P	T	D	Q	Y	G	I	N	N	Y	S	A	N	P	E	Q	V	R	R	W	L	A	A	.	.	A	A	R	A	L	A	X	L	G	D	G
Template Known Secondary structure							.	.	T	T	S								.			S	S											T	T								B				B	T	T	B				T	T		B												.	.											T
Template Predicted Secondary structure							.	.											.																																																		.	.
Template SS confidence
		188	.	190	.	.			.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.			.	.	.	.	.	.	.	.	260	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	N	N	I	V	P	A	E	D	L	D	R	S	Y	I	V	Y	P	R	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	D	D	A	V	S	E	T	E	Q	A	S	L	R	S	L	R	R	G	V
Template Known Secondary structure		T														T	T	S
Template Predicted Secondary structure
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions