Job Description P25889 Confidence 91.05% Date Thu Jan 5 11:42:42 GMT 2012 Rank 365 Aligned Residues 229 % Identity 17% Template c3fs2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase; PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate2 aldolase from bruciella melitensis at 1.85a resolution Resolution 1.85 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.			.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.										.
Query SS confidence																.	.										.
Query Sequence		T	K	D	L	S	I	T	F	C	G	V	K	F	P	.	.	N	P	F	C	L	S	S	S	P	.	V	G	N	C	Y	E	M	C	A	K	A	Y	D	T	G	W	G	G	V	V	F	K	T	I	G	F	F	I	A	N	E	V	S	P	R	F	D	H	L	V	K	E	D	T	G	F	I	G	F	K	N	M	E	Q
Query Conservation																.	.										.
Alig confidence																.	.										.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	A	N	S	T	V	K	V	G	N	V	T	F	S	N	S	A	P	L	A	L	I	A	G	P	C	Q	M	E	T	R	D	H	A	F	E	M	A	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K	E	M	T	D	K	L	G	I	G	L	V	Y	K	S	S	F	D
Template Known Secondary structure					S	S				T	T					T	T	S									S	B														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T								B
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.																						.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	E	H	P	L	E	E	N	L	A	A	L	R	R	L	K	E	D	Y	P	D	K	V	L	I	A	S	I	M	G	E	N	E	Q	Q	W	E	E	L	A	R	L	V	Q	E	A	G	A	D	M	I	E	C	N	F	S	C	P	Q	M	T	S	H	A	M	G	S	D	V	G	Q	S	P	E	L	V	E	K	Y
Query Conservation
Alig confidence																						.											.	.	.	.	.	.											.						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.											.	.	.	.	.	.											.						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	A	N	I	G	L	E	K	A	L	E	V	F	S	D	L	K	K	E	Y	.	G	F	P	V	L	T	D	I	H	T	.	.	.	.	.	.	E	E	Q	C	A	A	V	A	P	V	.	V	D	V	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	I	P	A	F	L	C	R	Q	T	D	L	L	I	A	A
Template Known Secondary structure																						.										S	.	.	.	.	.	.								T	T	T	.		S				.	.	.	.	.	.	.	.	.	.	.	.			G	G	G	T	T
Template Predicted Secondary structure																						.											.	.	.	.	.	.											.						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.							.	.	.	.	.	.	.	.	100	.		.	.	.	.	.													.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.
Query SS confidence																				.	.
Query Sequence		C	R	A	V	K	R	G	S	T	L	P	M	L	A	K	M	T	P	.	.	N	I	G	D	M	C	E	V	A	L	A	A	K	R	G	G	A	D	G	I	A	A	I	N	T	V	K	S	I	T	N	I	D	L	N	Q	K	I	G	M	P	I	V	N	G	K	S	S	I	S	G	Y	S	G	K	A	V	K	P	I
Query Conservation																				.	.
Alig confidence			.	.	.	.	.													.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	.	.	.	.	.	R	T	G	R	V	V	N	V	K	K	G	Q	F	L	A	P	W	D	M	K	N	V	L	A	K	I	T	E	S	G	N	P	N	V	L	A	T	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	S	F	G	Y	N	T	L	V	S
Template Known Secondary structure			.	.	.	.	.		T	T	S								T	T			G	G	G										T	T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S	S
Template Predicted Secondary structure			.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		131						.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170																									.	.	.	.	.	.	.	.	.	180	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.										.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.											.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	R	F	I	Q	Q	M	R	T	H	P	E	L	R	D	F	P	I	S	G	I	G	G	I	E	T	.	.	.	.	.	.	.	.	.	W	E	D	A	A	E	F	L	L	L	G	A	A	T	L	Q	V	T	T	.	.	.	.	.	.	.	.	.	.	G	I	M	Q	Y	G	Y	R	I	V	E	D	M	A	S
Query Conservation																													.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.											.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.
Template Sequence		D	M	R	A	L	P	I	M	A	G	L	G	A	.	.	.	.	P	V	I	F	D	A	T	H	S	V	Q	Q	P	G	Q	R	E	F	V	E	T	L	A	R	A	A	V	A	V	G	V	A	G	F	F	I	E	T	H	E	D	P	D	N	A	P	S	D	G	P	N	M	V	P	I	D	K	M	P	A	L	L	E
Template Known Secondary structure			T	T							T	T	T	S	.	.	.	.										T						G	G	G														S								S	S	G	G	G		S	S	S	G	G	G				G	G	G
Template Predicted Secondary structure															.	.	.	.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.					.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		299	300	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	S	H	Y	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	M	A	F	D	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions