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Job DescriptionP25889
Confidence96.70%DateThu Jan 5 11:42:42 GMT 2012
Rank268Aligned Residues172
% Identity18%Templatec3fk4A_
PDB info PDB header:isomeraseChain: A: PDB Molecule:rubisco-like protein; PDBTitle: crystal structure of rubisco-like protein from bacillus2 cereus atcc 14579
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   94.....100........ .110.........120.........130. ........140.........150.........160......
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Query Sequence  RLKEDYPDKVLIASI. . . . MGENEQQWEELARLVQEAGADMI. . . ECNFSCPQMTSHAMGSDVGQSPELVEKYCRAVKRG
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Template Sequence  RNLLQVHDRPLLMSIFKGMIGRNIGYLKTQLRDQAIGGVDIVKDDEILFENALTP. . . . . . . LTKRIVSGKEVLQSVYET
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   132.......140.........150.........160.........170.........180...... ...190.........200....
 
   167..170.. .......180.........190.........200 .........210...... ...220.........230......... 240
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Query Sequence  STLPML. . AKMTPNIGDMCEVALAAKRGGADGIAAI. NTVKSITNIDLNQKIG. . MPIVNGKSSISGYSGKAVKPIAL. R
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Template Sequence  YGHKTLYAVNLTGRTFDLKENAKRAVQAGADILLFNVFAYGLDVLQSLAEDDEIPVPIMAHPAVSGAYSASKLYGVSSPL
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   205....210.........220.........230.........240.........250.........260.........270.........280....
 
   241........250.........260.........270...
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Query Sequence  FIQQMRTHPELRDFPISGIGGIETWEDAAEFLL
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Template Sequence  LLGKLLRYAG. ADFSLFPSPYKEEALAISKYLT
Template Known Secondary structure  TT.
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   285....290.... .....300.........310......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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