Job Description P25889 Confidence 73.94% Date Thu Jan 5 11:42:42 GMT 2012 Rank 428 Aligned Residues 154 % Identity 12% Template c3dfyJ_ PDB info PDB header:isomerase Chain: J: PDB Molecule:muconate cycloisomerase; PDBTitle: crystal structure of apo dipeptide epimerase from2 thermotoga maritima Resolution 2.10 Å

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		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		P	D	K	V	L	I	A	S	I	M	G	E	N	E	Q	Q	W	E	E	L	A	R	L	V	Q	E	A	G	A	D	M	I	E	C	N	F	S	C	P	Q	M	T	S	H	A	M	G	S	D	V	G	Q	S	P	E	L	V	E	K	Y	C	R	A	V	K	R	G	S	.	T	L	P	M	L	A	K	M	T	P	N
Query Conservation																																																																						.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	E	I	E	T	D	K	T	V	G	I	D	T	V	E	N	R	V	K	E	A	K	K	I	F	E	E	G	F	R	V	I	K	I	K	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	N	L	K	E	D	I	E	A	V	E	E	I	A	K	V	T	R	G	A	K	Y	I	V	D	A	N	M	G
Template Known Secondary structure		S				B						S																T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	S															T	S	T	T								T	T
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.															.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		179	180			.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		I	G	.	.	D	M	C	E	V	A	L	A	A	K	R	G	G	A	D	G	I	A	A	I	N	T	V	K	S	I	T	N	I	D	L	N	Q	K	I	G	M	P	I	V	N	G	K	S	S	I	S	G	Y	S	G	K	A	V	K	P	I	A	L	R	F	I	Q	Q	M	R	T	H	P	E	L	R	D	F	P	I
Query Conservation				.	.
Alig confidence				.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Sequence		Y	T	Q	K	E	A	V	E	F	A	R	A	V	Y	Q	K	G	I	D	I	A	V	Y	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	P	V	R	R	E	D	I	E	G	L	K	F	V	R	F	H	.	.	.	S	P	F	P	V
Template Known Secondary structure		S															T	T				S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S		T	T												.	.	.		S	S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.																																.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.				.	.	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.		.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		S	G	I	G	G	I	E	T	W	E	D	A	A	E	F	L	L	L	G	.	A	A	T	L	Q	V	T	T	G	I	M	Q	Y	G	Y	R	I	V	E	D	M	A	S	G	L	S	H	Y
Query Conservation																					.
Alig confidence																					.										.		.
Template Conservation																															.		.
Template Sequence		A	A	D	E	S	A	R	T	K	F	D	V	M	R	L	V	K	E	E	A	V	D	Y	V	N	I	K	L	M	.	K	.	S	G	I	S	D	A	L	A	I	V	E	I	A	E	S	S
Template Known Secondary structure				S	T	T		S	S										T	T			S								.		.															T	T
Template Predicted Secondary structure																															.		.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.		.		.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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