Return to main results Retrieve Phyre Job Id

Job DescriptionP25889
Confidence97.15%DateThu Jan 5 11:42:42 GMT 2012
Rank233Aligned Residues215
% Identity14%Templatec2uvaI_
PDB info PDB header:transferaseChain: I: PDB Molecule:fatty acid synthase beta subunits; PDBTitle: crystal structure of fatty acid synthase from thermomyces2 lanuginosus at 3.1 angstrom resolution. this file contains3 the beta subunits of the fatty acid synthase. the entire4 crystal structure consists of one heterododecameric fatty5 acid synthase and is described in remark 400
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.... .....30.........40.........50.........60.........70.........80....
Predicted Secondary structure 








.


























Query SS confidence 


















.



























































Query Sequence  LSITFCGVKFPNPFCLSSS. PVGNCYEMCAKAYDTGWGGVVFKTIGFFIANEVSPRFDHLVKEDTGFIGFKNMEQIAEHP
Query Conservation 

    
  
 


  


.               
 
 

 


         
                
        
Alig confidence 


















.
















.............................













Template Conservation 
 







 












  




  



.............................
 





      
Template Sequence  VDTKMSRLLGVPPVMVAGMTPTTVPWDFVAATMNAGY. . . . . . . . . . . . . . . . . . . . . . . . . . . . . HIELAGGGYYNAQK
Template Known Secondary structure 
TS
S


TTTT
STT
.............................
GGG

S
Template Predicted Secondary structure 
















.............................





Template SS confidence 















































































   590.........600.........610.........620...... ...630.........640
 
   85....90.........100.........110.........120.........130.........140.........150.........160....
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  LEENLAALRRLKEDYPDKVLIASIMGENEQQWEELARLVQEAGADMIECNFSCPQMTSHAMGSDVGQSPELVEKYCRAVK
Query Conservation                      
 

 
                 

 



 
 
       
            
   
 
Alig confidence 












..
































.......









.












.
Template Conservation     

  
   
 ..





 
 

  
    


 

 


  
 
.......









.

 


 


  
.
Template Sequence  MSDAISKIEKAIP. . PGRGITVNLIYVNPRAMGWQIPLLGRLRADGVP. . . . . . . IEGLTIGAGV. PSIEVANEYIQTL.
Template Known Secondary structure  GGGS
..TT

TT
TTTTT

.......SS
.

S.
Template Predicted Secondary structure 

..








.......





.


.
Template SS confidence 















































































   641........650... ......660.........670.........680...... ...690...... ...700.........
 
   165....170.........180.........190.........200.........210.........220.........230.........240....
Predicted Secondary structure 













































Query SS confidence 















































































Query Sequence  RGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVKPIALRFIQQ
Query Conservation       

 


 
       

  
   




   

        
               

 

  
 
 

  
  
Alig confidence  ...





































...................



















Template Conservation  ...

 








 

  

 

 
 
 










...................





 



 


 


 
Template Sequence  . . . GIRHISFKPGSVDAIQQVINIAKANPTFPIILQWTGGR. . . . . . . . . . . . . . . . . . . GGGHHSFEDFHQPILLMYSR
Template Known Secondary structure  ...

S


S
TTS


TT...................
SSS

S

S
Template Predicted Secondary structure  ...














...................








Template SS confidence 















































































   710.........720.........730.........740....... ..750.........760.......
 
   245....250.........260.........270...... ...280......
Predicted Secondary structure 












............
Query SS confidence 































. . . . . . . . . . . .









Query Sequence  MRTHPELRDFPISGIGGIETWEDAAEFLLLGA. . . . . . . . . . . . ATLQVTTGIM
Query Conservation 
        



  


    

   
 


............  


 

  
Alig confidence 



...





















.

............









Template Conservation 

  ... 










  
 
 



.
 

   
 












 
Template Sequence  IRKC. . . SNIVLVAGSGFGGSEDTYPYLT. GSWSTKFGYPPMPFDGCMFGSRMM
Template Known Secondary structure  TS...TTSS

S.T
GGGTTTS




S
SGGGG
Template Predicted Secondary structure 

...












.









Template SS confidence 





















































   768.770. ........780.........790... ......800.........810.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions