Job Description P25889 Confidence 97.15% Date Thu Jan 5 11:42:42 GMT 2012 Rank 233 Aligned Residues 215 % Identity 14% Template c2uvaI_ PDB info PDB header:transferase Chain: I: PDB Molecule:fatty acid synthase beta subunits; PDBTitle: crystal structure of fatty acid synthase from thermomyces2 lanuginosus at 3.1 angstrom resolution. this file contains3 the beta subunits of the fatty acid synthase. the entire4 crystal structure consists of one heterododecameric fatty5 acid synthase and is described in remark 400 Resolution 3.10 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		L	S	I	T	F	C	G	V	K	F	P	N	P	F	C	L	S	S	S	.	P	V	G	N	C	Y	E	M	C	A	K	A	Y	D	T	G	W	G	G	V	V	F	K	T	I	G	F	F	I	A	N	E	V	S	P	R	F	D	H	L	V	K	E	D	T	G	F	I	G	F	K	N	M	E	Q	I	A	E	H	P
Query Conservation																					.
Alig confidence																					.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	D	T	K	M	S	R	L	L	G	V	P	P	V	M	V	A	G	M	T	P	T	T	V	P	W	D	F	V	A	A	T	M	N	A	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	I	E	L	A	G	G	G	Y	Y	N	A	Q	K
Template Known Secondary structure											T	S		S							T	T	T	T		S										T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						G	G	G			S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.																														.	.	.	630	.	.	.	.	.	.	.	.	.	640
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	E	N	L	A	A	L	R	R	L	K	E	D	Y	P	D	K	V	L	I	A	S	I	M	G	E	N	E	Q	Q	W	E	E	L	A	R	L	V	Q	E	A	G	A	D	M	I	E	C	N	F	S	C	P	Q	M	T	S	H	A	M	G	S	D	V	G	Q	S	P	E	L	V	E	K	Y	C	R	A	V	K
Query Conservation
Alig confidence															.	.																																		.	.	.	.	.	.	.											.														.
Template Conservation															.	.																																		.	.	.	.	.	.	.											.														.
Template Sequence		M	S	D	A	I	S	K	I	E	K	A	I	P	.	.	P	G	R	G	I	T	V	N	L	I	Y	V	N	P	R	A	M	G	W	Q	I	P	L	L	G	R	L	R	A	D	G	V	P	.	.	.	.	.	.	.	I	E	G	L	T	I	G	A	G	V	.	P	S	I	E	V	A	N	E	Y	I	Q	T	L	.
Template Known Secondary structure										G	G	G	S		.	.	T	T									T	T		T	T														T	T	T			.	.	.	.	.	.	.								S	S		.													S	.
Template Predicted Secondary structure															.	.																																		.	.	.	.	.	.	.											.														.
Template SS confidence
		641	.	.	.	.	.	.	.	.	650	.	.	.			.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.								.	.	.	690	.	.	.	.	.	.		.	.	.	700	.	.	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	S	T	L	P	M	L	A	K	M	T	P	N	I	G	D	M	C	E	V	A	L	A	A	K	R	G	G	A	D	G	I	A	A	I	N	T	V	K	S	I	T	N	I	D	L	N	Q	K	I	G	M	P	I	V	N	G	K	S	S	I	S	G	Y	S	G	K	A	V	K	P	I	A	L	R	F	I	Q	Q
Query Conservation
Alig confidence		.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	G	I	R	H	I	S	F	K	P	G	S	V	D	A	I	Q	Q	V	I	N	I	A	K	A	N	P	T	F	P	I	I	L	Q	W	T	G	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	H	H	S	F	E	D	F	H	Q	P	I	L	L	M	Y	S	R
Template Known Secondary structure		.	.	.			S								S															T	T	S									T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	S			S			S
Template Predicted Secondary structure		.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
					710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.																				.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.													.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	R	T	H	P	E	L	R	D	F	P	I	S	G	I	G	G	I	E	T	W	E	D	A	A	E	F	L	L	L	G	A	.	.	.	.	.	.	.	.	.	.	.	.	A	T	L	Q	V	T	T	G	I	M
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.																							.			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.																							.
Template Sequence		I	R	K	C	.	.	.	S	N	I	V	L	V	A	G	S	G	F	G	G	S	E	D	T	Y	P	Y	L	T	.	G	S	W	S	T	K	F	G	Y	P	P	M	P	F	D	G	C	M	F	G	S	R	M	M
Template Known Secondary structure				T	S	.	.	.	T	T							S	S			S										.	T		G	G	G	T	T	T	S						S					S	G	G	G	G
Template Predicted Secondary structure						.	.	.																							.
Template SS confidence
		768	.	770	.				.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.		.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions