Job Description P25889 Confidence 99.97% Date Thu Jan 5 11:42:42 GMT 2012 Rank 17 Aligned Residues 283 % Identity 16% Template c2rduA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:hydroxyacid oxidase 1; PDBTitle: crystal structure of human glycolate oxidase in complex with2 glyoxylate Resolution 1.65 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.							.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.
Query Sequence		T	K	D	L	S	I	T	F	C	G	V	K	F	P	N	P	F	C	L	S	S	S	P	V	G	N	.	.	.	.	.	.	C	Y	E	M	C	A	K	A	Y	D	T	G	W	G	G	V	V	F	K	T	I	G	F	F	I	A	N	E	V	S	P	R	F	D	H	L	V	K	E	D	T	G	F	I	G	F	K	N
Query Conservation																												.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.																	.															.	.	.	.	.	.
Template Conservation																																																		.															.	.	.	.	.	.
Template Sequence		E	T	D	L	S	T	S	V	L	G	Q	R	V	S	M	P	I	C	V	G	A	T	A	M	Q	R	M	A	H	V	D	G	E	L	A	T	V	R	A	C	Q	S	L	G	T	G	M	M	.	L	S	S	W	A	T	S	S	I	E	E	V	A	E	.	.	.	.	.	.	A	G	P	E	A	L	R	W	L	Q	L
Template Known Secondary structure		T		B						T	T				S	S	S							S		G	G	G	T	S	T	T													T					.			T	T		S	S								.	.	.	.	.	.			T	T	S
Template Predicted Secondary structure																																																		.															.	.	.	.	.	.
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120							.	.	.	.	.	.	.	.	.	130	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		M	E	Q	I	A	E	H	P	L	E	E	N	L	A	A	L	R	R	L	K	E	D	Y	P	D	K	V	L	I	A	S	I	M	G	E	N	E	Q	Q	W	E	E	L	A	R	L	V	Q	E	A	G	A	D	M	I	E	C	N	F	S	C	P	Q	M	T	S	H	A	M	G	S	D	V	G	Q	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence																																																																													.	.	.	.	.
Template Conservation
Template Sequence		Y	I	Y	K	D	R	E	V	T	K	K	L	V	R	Q	A	E	K	M	G	Y	K	A	I	F	V	T	V	D	T	P	Y	L	G	N	R	L	D	D	V	R	N	R	F	K	L	P	P	Q	L	R	M	K	N	F	E	T	S	T	L	S	F	S	P	E	E	N	F	G	D	D	S	G	L	A	A	Y	V	A	K
Template Known Secondary structure				B	S	S														T	T									S		S	S											T					T	T				T	T		S	S	T	T	T	T	T		T	T	S				S	S
Template Predicted Secondary structure
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
				152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	S	P	E	L	V	E	K	Y	C	R	A	V	K	R	G	S	T	L	P	M	L	A	K	M	T	P	N	I	G	D	M	C	E	V	A	L	A	A	K	R	G	G	A	D	G	I	A	A	I	N	T	V	K	S	I	T	N	I	D	L	N	Q	K	I	G	M	P	I	V	N	G	K	S	S	I	S	G	Y
Query Conservation		.	.
Alig confidence		.	.																															.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	I	D	P	S	I	S	W	E	D	I	K	W	L	R	R	L	T	S	L	P	I	V	A	K	G	I	L	R	G	D	D	.	.	.	.	A	R	E	A	V	K	H	G	L	N	G	I	L	V	S	N	H	G	A	R	Q	L	D	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			B		T	T															S									S				.	.	.	.							T	T									G	G	G	T	S	S	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																		.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.					.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.								.	.	290	.		.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.					.
Query SS confidence																																																												.	.	.	.	.	.	.					.
Query Sequence		S	G	K	A	V	K	P	I	A	L	R	F	I	Q	Q	M	R	T	H	P	E	L	R	D	F	P	I	S	G	I	G	G	I	E	T	W	E	D	A	A	E	F	L	L	L	G	A	A	T	L	Q	V	T	T	G	I	M	Q	.	.	.	.	.	.	.	Y	G	Y	R	.	I	V	E	D	M	A	S	G	L	S
Query Conservation																																																												.	.	.	.	.	.	.					.
Alig confidence		.	.	.	.	.	.																.																																					.	.	.	.	.	.	.					.
Template Conservation		.	.	.	.	.	.																.
Template Sequence		.	.	.	.	.	.	P	A	T	I	D	V	L	P	E	I	V	E	A	V	E	.	G	K	V	E	V	F	L	D	G	G	V	R	K	G	T	D	V	L	K	A	L	A	L	G	A	K	A	V	F	V	G	R	P	I	V	W	G	L	A	F	Q	G	E	K	G	V	Q	D	V	L	E	I	L	K	E	E	F	R
Template Known Secondary structure		.	.	.	.	.	.															T	.	T	S	S						S	S			S										T	T		S					S
Template Predicted Secondary structure		.	.	.	.	.	.																.
Template SS confidence
								269	270	.	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Y	L	A	D	Q	G	F	D	S	L	Q	E	M	V	G	L	A	N	N	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	M	A	L	S	G	C	Q	N	V	K	V	I	D	K	T	L	V	R	K
Template Known Secondary structure								T		S	B	G	G	G			G	G	G
Template Predicted Secondary structure
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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