Job Description P25889 Confidence 97.55% Date Thu Jan 5 11:42:42 GMT 2012 Rank 212 Aligned Residues 175 % Identity 30% Template c2nv2U_ PDB info PDB header:lyase/transferase Chain: U: PDB Molecule:pyridoxal biosynthesis lyase pdxs; PDBTitle: structure of the plp synthase complex pdx1/2 (yaad/e) from bacillus2 subtilis Resolution 2.12 Å

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		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	L	A	R	L	V	Q	E	A	G	A	D	M	I	E	C	N	F	S	C	P	Q	M	T	S	H	A	M	G	S	D	V	G	Q	S	P	E	L	V	E	K	Y	C	R	A	V	K	R	G	S	T	L	P	M	L	A	K	M	T	P	N	I	G	D	M	C	E	V	A	L	A	A	K	R	G	G	A	D	G
Query Conservation
Alig confidence																																												.	.	.	.															.	.							.
Template Conservation																																												.	.	.	.															.	.							.
Template Sequence		A	E	Q	A	K	I	A	E	E	A	G	A	V	A	V	M	A	L	E	R	V	P	A	D	I	R	A	A	G	G	V	A	R	M	A	D	P	T	I	V	E	E	.	.	.	.	V	M	N	A	V	S	I	P	V	M	A	K	A	R	.	.	I	G	H	I	V	E	.	A	R	V	L	E	A	M	G	V	D	Y
Template Known Secondary structure											T	T		S						S	S									T														.	.	.	.						S	S								.	.	T	T					.							T	T		S
Template Predicted Secondary structure																																												.	.	.	.															.	.							.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.					70	.	.	.	.	.	.	.	.	.	80	.	.	.			.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100
		197	.	.	200	.			.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	A	A	I	N	.	.	T	V	K	S	I	T	N	I	D	L	N	Q	K	I	G	M	P	I	V	N	G	K	S	S	I	S	G	Y	S	G	K	A	V	K	P	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation							.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.																											.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.
Template Sequence		I	D	E	S	E	V	L	T	P	A	D	E	E	F	H	L	N	K	N	E	Y	T	V	P	F	V	C	G	C	R	D	L	G	.	.	.	.	E	A	T	R	R	I	A	E	G	A	S	M	L	R	T	K	G	E	P	G	T	G	N	I	V	E	A	V	R	H	M	R	K	V	N	A	Q	V	R	K	V	V	A
Template Known Secondary structure						T	T	S			S		S	S					G	G	G		S	S							S	S			.	.	.	.								T	T		S								T	T	S			T
Template Predicted Secondary structure																																			.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.					.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
																		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.			290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	F	I	Q	Q	M	R	T	H	P	E	L	R	D	F	P	I	S	G	I	G	G	I	E	T	W	E	D	A	A	E	F	L	L	L	G	A	A	T	L	Q	V	T	T	G	I	M	Q	Y	G	.	.	Y	R	I	V	E	D	M	A	S	G	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																																							.	.
Template Conservation																														.
Template Sequence		M	S	E	D	E	L	M	T	E	A	K	N	L	G	A	P	Y	E	L	L	L	Q	I	K	K	D	G	K	.	L	P	V	V	N	F	A	A	G	G	V	A	T	P	A	D	A	A	L	M	M	Q	L	G	A	D	G	V	F	V	G	S	G	I	F	K	S	D	N	P	A	K	F	A	K	A	I	V	E	A	T
Template Known Secondary structure		S		G	G	G									T													T	S	.		S	S				B		S				S										T	T		S						T					S	S
Template Predicted Secondary structure																														.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		301	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	H	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	H	F
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		256	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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