Job Description P25889 Confidence 99.17% Date Thu Jan 5 11:42:42 GMT 2012 Rank 97 Aligned Residues 216 % Identity 16% Template c2ekcA_ PDB info PDB header:lyase Chain: A: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: structural study of project id aq_1548 from aquifex aeolicus vf5 Resolution 2.00 Å

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		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.							.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.										.	.	.	.	.	.
Query SS confidence																																																				.	.										.	.	.	.	.	.
Query Sequence		L	E	E	N	L	A	A	L	R	R	L	K	E	D	Y	P	D	K	V	L	I	A	S	I	M	G	E	N	E	Q	Q	W	E	E	L	A	R	L	V	Q	E	A	G	A	D	M	I	E	C	N	.	.	F	S	C	P	Q	M	T	S	H	.	.	.	.	.	.	A	M	G	S	D	V	G	Q	S	P	E	L	V
Query Conservation																																																				.	.										.	.	.	.	.	.
Alig confidence																	.	.																																		.	.										.	.	.	.	.	.
Template Conservation																	.	.
Template Sequence		I	S	D	K	F	T	E	L	K	E	K	R	E	K	A	.	.	L	V	S	Y	L	M	V	G	Y	P	D	Y	E	T	S	L	K	A	F	K	E	V	L	K	N	G	T	D	I	L	E	I	G	F	P	F	S	D	P	V	A	D	G	P	T	I	Q	V	A	H	E	V	A	L	K	N	G	I	R	F	E	D	V
Template Known Secondary structure													T	B			.	.							T	T	S	S															T	T		S									S			T	T	S														T	T
Template Predicted Secondary structure																	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.			.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		157	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.				.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.																			.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure												.										.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.										.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	K	Y	C	R	A	V	K	R	G	.	S	T	L	P	M	L	A	K	M	.	.	.	T	P	N	I	G	D	M	C	E	V	A	L	A	A	K	R	G	G	A	D	G	I	A	A	I	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	K	S	I	T	N	I	D	L	N	Q	K
Query Conservation												.										.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.										.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	E	L	S	E	T	L	R	K	E	F	P	D	I	P	F	L	L	M	T	Y	Y	N	P	I	F	R	I	G	L	E	K	F	C	R	L	S	R	E	K	G	I	D	G	F	I	V	P	D	L	P	P	E	E	A	E	E	L	K	A	V	M	K	K	Y	V	L	S	F	V	P	L	G	A	P	T	S	T	R	K
Template Known Secondary structure													T	T	S																										T	T							T	T																T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.					.	.	290
Predicted Secondary structure																																																																											.	.	.	.
Query SS confidence																																																																											.	.	.	.
Query Sequence		I	G	M	P	I	V	N	G	K	S	S	I	S	G	Y	S	G	K	A	V	K	P	I	A	L	R	F	I	Q	Q	M	R	T	H	P	E	L	R	D	F	P	I	S	G	I	G	G	I	E	T	W	E	D	A	A	E	F	L	L	L	G	A	A	T	L	Q	V	T	T	G	I	M	Q	.	.	.	.	Y	G	Y
Query Conservation																																																																											.	.	.	.
Alig confidence																																				.	.	.																		.																			.	.	.	.
Template Conservation																																				.	.	.																		.
Template Sequence		R	I	K	L	I	C	E	A	A	D	E	M	T	Y	F	V	S	V	T	G	Y	E	R	I	K	K	K	V	E	E	Y	R	E	L	.	.	.	C	D	K	P	V	V	V	G	F	G	V	S	K	K	E	H	A	.	R	E	I	G	S	F	A	D	G	V	V	V	G	S	A	L	V	K	L	A	G	Q	K	K	I
Template Known Secondary structure											S	S						S	S																	.	.	.			S						S	S			S					.					T	T	S	S														T	T
Template Predicted Secondary structure																																				.	.	.																		.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.				.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	V	E	D	M	A	S	G	L	S	H	Y	L	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	D	L	G	N	L	V	K	E	L	K	E	G	L	R	E
Template Known Secondary structure														T	T	B
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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