Job Description P25889 Confidence 95.00% Date Thu Jan 5 11:42:42 GMT 2012 Rank 323 Aligned Residues 229 % Identity 18% Template c1zcoA_ PDB info PDB header:lyase Chain: A: PDB Molecule:2-dehydro-3-deoxyphosphoheptonate aldolase; PDBTitle: crystal structure of pyrococcus furiosus 3-deoxy-d-arabino-2 heptulosonate 7-phosphate synthase Resolution 2.25 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.						.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.
Query SS confidence																													.	.	.	.	.
Query Sequence		L	T	K	D	L	S	I	T	F	C	G	V	K	F	P	N	P	F	C	L	S	S	S	P	V	G	N	.	.	.	.	.	C	Y	E	M	C	A	K	A	Y	D	T	G	W	G	G	V	V	F	K	T	I	G	F	F	I	A	N	E	V	S	P	R	F	D	H	L	V	K	E	D	T	G	F	I	G	F	K	N
Query Conservation																													.	.	.	.	.
Alig confidence																													.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	D	E	K	T	V	V	K	I	N	D	V	K	F	G	E	G	F	T	I	I	A	G	P	C	S	I	E	S	R	E	Q	I	M	K	V	A	E	F	L	A	E	V	G	I	K	V	L	R	G	G	A	F	K	P	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S
Template Known Secondary structure		T		S							T	T				T	S	S								S	B																	T	T							B	S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.																							.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	E	Q	I	A	E	H	P	L	E	E	N	L	A	A	L	R	R	L	K	E	D	Y	P	D	K	V	L	I	A	S	I	M	G	E	N	E	Q	Q	W	E	E	L	A	R	L	V	Q	E	A	G	A	D	M	I	E	C	N	F	S	C	P	Q	M	T	S	H	A	M	G	S	D	V	G	Q	S	P	E	L	V
Query Conservation
Alig confidence										.															.											.	.	.	.	.	.											.						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.															.											.	.	.	.	.	.											.						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	Y	S	F	Q	G	Y	G	.	E	K	A	L	R	W	M	R	E	A	A	D	E	Y	.	G	L	V	T	V	T	E	V	M	D	.	.	.	.	.	.	T	R	H	V	E	L	V	A	K	Y	.	S	D	I	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	I	G	A	R	N	S	Q	N	F	E	L	L
Template Known Secondary structure		T	T	S					T	.															.	T										.	.	.	.	.	.	G	G	G								.		S				.	.	.	.	.	.	.	.	.	.	.	.			G	G	G	T	T
Template Predicted Secondary structure										.															.											.	.	.	.	.	.											.						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		65	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.							.	.	.	100	.	.	.	.	.	.		.	.	.	110	.													.	.	.	.	.	.	.	.	120	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.					200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																							.	.																							.	.	.	.
Query SS confidence																							.	.																							.	.	.	.
Query Sequence		E	K	Y	C	R	A	V	K	R	G	S	T	L	P	M	L	A	K	M	T	P	.	.	N	I	G	D	M	C	E	V	A	L	A	A	K	R	G	G	A	D	G	I	A	A	.	.	.	.	I	N	T	V	K	S	I	T	N	I	D	L	N	Q	K	I	G	M	P	I	V	N	G	K	S	S	I	S	G	Y	S
Query Conservation																							.	.																							.	.	.	.
Alig confidence					.	.	.	.	.														.	.																							.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	E	V	.	.	.	.	.	G	K	V	E	N	P	V	L	L	K	R	G	M	G	N	T	I	Q	E	L	L	Y	S	A	E	Y	I	M	A	Q	G	N	E	N	V	I	L	C	E	R	G	I	R	T	F	E	T	A	T	R	F	T	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					.	.	.	.	.	T	T	S	S	S								T	T															T	T	T											B			S			S	S	S	S	B			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure					.	.	.	.	.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		124	.	.						.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.							.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.											.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Query Sequence		G	K	A	V	K	P	I	A	L	R	F	I	Q	Q	M	R	T	H	P	E	L	R	D	F	P	I	S	G	I	G	G	I	E	T	W	E	D	.	.	.	.	.	.	A	A	E	F	L	L	L	G	A	A	T	L	Q	V	T	T	G	.	.	.	.	.	.	.	.	.	.	I	M	Q	Y	G	Y	R	I	V	E
Query Conservation																																							.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.												.	.	.																.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.												.	.	.
Template Sequence		.	.	.	.	.	.	.	.	I	S	A	V	P	V	V	K	E	L	S	.	.	.	H	L	P	I	I	V	D	P	S	H	P	A	G	R	R	S	L	V	I	P	L	A	K	A	A	Y	A	I	G	A	D	G	I	M	V	E	V	H	P	E	P	E	K	A	L	S	D	S	Q	Q	Q	L	T	F	D	D	F	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	T	T									B	.	.	.	S	S						S	S	T	T	T		S	G	G	G											T	T		S						B		S	S	G	G	G		S	S		T	T	T		B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.												.	.	.
Template SS confidence
										181	.	.	.	.	.	.	.	.	190	.				.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		295	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	M	A	S	G	L	S	H	Y	L	A	D	Q	G
Query Conservation
Alig confidence										.
Template Conservation										.
Template Sequence		Q	L	L	K	E	L	E	A	.	L	G	W	K	G
Template Known Secondary structure										.	T	T
Template Predicted Secondary structure										.
Template SS confidence
		250	.	.	.	.	.	.	.		.	.	260	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions