|   |
115 | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | W | E | E | L | A | R | L | V | Q | E | A | G | A | D | M | I | E | C | N | F | S | C | P | Q | M | T | S | H | A | M | G | S | D | V | G | Q | S | P | E | L | V | E | K | Y | C | R | A | V | K | R | G | S | T | L | P | M | L | A | K | M | T | P | N | I | G | D | M | C | E | V | A | L | A | A | K | R | G | G | A |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
|   |
|   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|   |
|
|
|   |
|   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |
|   | . |   |
|
|   |
|
|
|
|
|
|
|   |   |   |
|   |
|
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |
|   |   |   |   |   |   |
|
|
|   |
| . | . | . |
|
|
|
|
|   |   |
|
|   |
|
|   |   |   |
|
|
Template Sequence |   |
D | P | A | R | I | A | A | I | Y | K | . |
H | Y | A | S | A | I | S | V | L | T | D | E | K | Y | F | Q | G | S | F | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
F | L | P | I | V | S | Q | I | A | P | Q | P | I | L | C | K | . |
. |
. |
D | F | I | I | D | P | Y | Q | I | Y | L | A | R | Y | Y | Q | A |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  | T | . | T | T |
| S |  |  |  |  |  |
|
| S | T | T | T |
|
|
| T | T | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
| S |
|  |  |  |  | . | . | . | S |
|
|
| S |  |  |  |  |  |  |  |  |  | T | T |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  | . |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
69 | 70 | . | . | . | . | . | . | . | . | |
. | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | |
|
|
. | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . |
  |
  |   |
195 | . | . | . | . | 200 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | G | I | A | A | I | N | T | V | K | S | I | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N | I | D | L | N | Q | K | I | G | M | P | I | V | N | G | K | S | S | I | S | G | Y | S | G | K | A | V | K | P | I | A | L | R | F | I | Q | Q | M | R | T | H |
Query Conservation |   |
|
|
|   |   |   |
|
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |
|   |
|   |
|
|   |   |
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|
|
|   |   |
|
|
|
|
|   |   |   |
|
|   |   |
|   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|   |
| . | . | . | . | . | . | . |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
Template Sequence |   |
D | A | C | L | L | M | L | S | V | L | D | D | D | Q | Y | R | Q | L | A | A | V | A | H | S | L | E | M | G | V | L | T | E | V | S | N | E | E | E | Q | E | R | A | I | A | L | G | A | K | V | V | G | I | N | N | R | D | L | R | D | . |
. |
. |
. |
. |
. |
. |
L | S | I | D | L | N | R | T | R | E | L | A | P | K |
Template Known Secondary structure |   |
S |  |  |  |  |  | T | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
| S |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  | S |  |  | T | T | T | . | . | . | . | . | . | . | T |  |  |
| T |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
132 | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 200 | . | . | . | . |
  |
  |   |
249 | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | E | L | R | D | F | P | I | S | G | I | G | G | I | E | T | W | E | D | A | A | E | F | L | L | L | G | A | A | T | L | Q | V | T | T | G | I | M | Q | Y | G | Y | R | I | V | E | D | M | A | S | G | L | S | H | Y | L | A | D | Q | G | F | D | S | L | Q | E | M | V |
Query Conservation |   |
  |   |   |   |   |
|
|
|
|   |   |
|
|
|   |   |   |   |
|
|   |   |   |
|   |
|
|
|   |   |
|
|
|   |
|
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
| . |   |   |   |   |   |
|
|
|
|
|
|   |   |   |   |
|   | . |   |   |   |   |   |
|   |
|
|
|
|
|
|   |   |
|
|   |   | . |   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |
|
|
|
|
|
|   |   |
|
|
|   |
Template Sequence |   |
L | G | . |
H | N | V | T | V | I | S | E | S | G | I | N | T | Y | A | Q | V | . |
R | E | L | S | H | F | A | N | G | F | L | I | G | S | A | L | M | A | H | . |
D | D | L | H | A | A | V | R | R | V | L | L | G | E | N | K | V | C | G | L | T | R | G | Q | D | A | K |
Template Known Secondary structure |   |
 |
| . | T | T | S |  |  |  |  |  | S |
|
|
|
|  |  |  |  | . |  |  |  | T | T | T |
| S |  |  |  |  |
|  |  |  |  | T |
| . | S |
|  |  |  |  |  |  |  |  |  |  |
| S |
|  |  |
|
|
|
| S |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
| . |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  | . |  |  |  |  |  |
|
|
|  |  |  |  |
|  |  |  |  |
|
| . |
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
205 | . | |
. | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | |
. | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | |
. | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . |
  |