Return to main results Retrieve Phyre Job Id

Job DescriptionP25889
Confidence86.99%DateThu Jan 5 11:42:42 GMT 2012
Rank388Aligned Residues95
% Identity17%Templatec1nvmG_
PDB info PDB header:lyase/oxidoreductaseChain: G: PDB Molecule:4-hydroxy-2-oxovalerate aldolase; PDBTitle: crystal structure of a bifunctional aldolase-dehydrogenase :2 sequestering a reactive and volatile intermediate
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   103......110.........120.........130.........140.........150.........160....... ..170.........180
Predicted Secondary structure 

























..








Query SS confidence 
































































. .












Query Sequence  VLIASIMGENEQQWEELARLVQEAGADMIECNFSCPQMTSHAMGSDVGQSPELVEKYCRAVKRGS. . TLPMLAKMTPNIG
Query Conservation    
 

 
                 

 



 
 
       
            
   
    ..  

 


 
   
Alig confidence 




































...........
















..












Template Conservation                          


 
 
 

 
 ...........  
     

  
         
  
 


 
Template Sequence  GFLMMSHMIPAEKLAEQGKLMESYGATCIYMADSGGA. . . . . . . . . . . MSMNDIRDRMRAFKAVLKPETQVGMHAHHNLS
Template Known Secondary structure  TGGGS
T
S
TTS
...........

S
TTS
B
TTS
Template Predicted Secondary structure 
















...........










Template SS confidence 















































































   138.140.........150.........160.........170.... .....180.........190.........200......
 
   181........190......... 200........
Predicted Secondary structure 




.







Query SS confidence 


















.








Query Sequence  DMCEVALAAKRGGADGIAA. INTVKSITN
Query Conservation      

  
   




  . 

      
Alig confidence 


















.








Template Conservation 

 

 



 


  

 

 






Template Sequence  LGVANSIVAVEEGCDRVDASLAGMGAGAG
Template Known Secondary structure 
TT

BGGG
SSTT
Template Predicted Secondary structure 













Template SS confidence 




























   207..210.........220.........230.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions