Job Description P25889 Confidence 66.57% Date Thu Jan 5 11:42:42 GMT 2012 Rank 455 Aligned Residues 152 % Identity 11% Template c1mraA_ PDB info PDB header:racemase Chain: A: PDB Molecule:mandelate racemase; PDBTitle: mandelate racemase mutant d270n co-crystallized with (s)-atrolactate Resolution 2.10 Å

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		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																																																																			.	.
Query SS confidence																																																																			.	.
Query Sequence		V	L	I	A	S	I	M	G	E	N	E	Q	Q	W	E	E	L	A	R	L	V	Q	E	A	G	A	D	M	I	E	C	N	F	S	C	P	Q	M	T	S	H	A	M	G	S	D	V	G	Q	S	P	E	L	V	E	K	Y	C	R	A	V	K	R	G	S	.	.	T	L	P	M	L	A	K	M	T	P	N	I	G
Query Conservation																																																																			.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	A	Y	D	S	H	S	L	D	G	V	K	L	A	T	E	R	A	V	T	A	A	E	L	G	F	R	A	V	K	T	K	I	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	L	D	Q	D	L	A	V	V	R	S	I	R	Q	A	V	G	D	D	F	G	I	M	V	D	Y	N	Q	S	L	D
Template Known Secondary structure									S																T	T		S									.	.	.	.	.	.	.	.	.	.	.	.	.	S	S																	S	S	S							T	T		S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.														170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
				181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	D	M	C	E	V	A	L	A	A	K	R	G	G	A	D	G	I	A	A	I	N	T	V	K	S	I	T	N	I	D	L	N	Q	K	I	G	M	P	I	V	N	G	K	S	S	I	S	G	Y	S	G	K	A	V	K	P	I	A	L	R	F	I	Q	Q	M	R	T	H	P	E	L	R	D	F	P	I	S	G
Query Conservation		.	.
Alig confidence		.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Sequence		V	P	A	A	I	K	R	S	Q	A	L	Q	Q	E	G	V	T	W	I	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	P	T	L	Q	H	D	Y	E	G	H	Q	R	I	Q	S	K	.	.	.	L	N	V	P	V	Q	M
Template Known Secondary structure																T		S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S		T	T											T	.	.	.		S	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.																																		.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.				.	240	.	.	.	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	G	I	E	T	W	E	D	A	A	E	F	L	L	L	G	A	A	T	L	Q	V	T	T	G	I	M	Q	Y	G	Y	R	I	V	E	D	M	A	S	G	L	S	H	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	E	N	W	L	G	P	E	E	M	F	K	A	L	S	I	G	A	C	R	L	A	M	P	N	A	M	K	I	G	G	V	T	G	W	I	R	A	S	A	L	A	Q	Q	F
Template Known Secondary structure			T	T			S										T	T			S					B	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions