Return to main results Retrieve Phyre Job Id

Job DescriptionP25889
Confidence39.53%DateThu Jan 5 11:42:42 GMT 2012
Rank500Aligned Residues98
% Identity18%Templatec1e1cA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:methylmalonyl-coa mutase alpha chain; PDBTitle: methylmalonyl-coa mutase h244a mutant
Resolution2.62 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   173......180.........190.........200.........210.........220.........230.........240.........250..
Predicted Secondary structure 











































Query SS confidence 















































































Query Sequence  AKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVKPIALRFIQQMRTHPELR
Query Conservation 


 
       

  
   




   

        
               

 

  
 
 

  
  
       
Alig confidence 





























.............................




















Template Conservation 
     
 
 

 
 

  


 






.............................
  
 
  
 
   
   
  
Template Sequence  VDVGPLFQTPEETARQAVEADVHVVGVSSL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . AGGHLTLVPALRKELDKLGRP
Template Known Secondary structure 

TTB
TT
S
.............................SS
TT
T
Template Predicted Secondary structure 













.............................






Template SS confidence 















































































   628.630.........640.........650....... ..660.........670........
 
   253......260.........270.........280.........290.........300......
Predicted Secondary structure 












Query SS confidence 





















































Query Sequence  DFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMASGLSHYLAD
Query Conservation   



  


    

   
 


  


 

    
      
   
   
  
Alig confidence 




.
















......
























Template Conservation     
 . 

  
      
  

......
      
                 
Template Sequence  DILIT. VGGVIPEQDFDELRKDG. . . . . . AVEIYTPGTVIPESAISLVKKLRAS
Template Known Secondary structure  TS.S

GGGTT......
TT

Template Predicted Secondary structure 

.






......







Template SS confidence 





















































   679680... ......690.........700 .........710.........720.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions