Job Description P25889 Confidence 96.13% Date Thu Jan 5 11:42:42 GMT 2012 Rank 293 Aligned Residues 160 % Identity 14% Template c1bwvA_ PDB info PDB header:lyase Chain: A: PDB Molecule:protein (ribulose bisphosphate carboxylase); PDBTitle: activated ribulose 1,5-bisphosphate carboxylase/oxygenase (rubisco)2 complexed with the reaction intermediate analogue 2-carboxyarabinitol3 1,5-bisphosphate Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.					.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.				.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.																								.	.	.
Query SS confidence																	.	.	.	.																								.	.	.
Query Sequence		R	L	K	E	D	Y	P	D	K	V	L	I	A	S	I	.	.	.	.	M	G	E	N	E	Q	Q	W	E	E	L	A	R	L	V	Q	E	A	G	A	D	M	I	.	.	.	E	C	N	F	S	C	P	Q	M	T	S	H	A	M	G	S	D	V	G	Q	S	P	E	L	V	E	K	Y	C	R	A	V	K	R	G
Query Conservation																	.	.	.	.																								.	.	.
Alig confidence																	.	.	.	.																								.	.	.			.								.	.	.	.	.	.	.
Template Conservation																																																	.								.	.	.	.	.	.	.
Template Sequence		R	E	R	L	D	K	F	G	R	P	L	L	G	C	T	T	K	P	K	L	G	L	S	G	K	N	Y	G	R	V	V	Y	E	A	L	K	G	G	L	D	F	V	D	D	E	N	I	.	N	S	Q	P	F	M	R	.	.	.	.	.	.	.	W	R	E	R	Y	L	F	T	M	E	A	V	N	K	A	S	A	A
Template Known Secondary structure						T			S	S								S	S	S	S																		T		S	B				T	T		.	S	S	B	T	T	B		.	.	.	.	.	.	.
Template Predicted Secondary structure																																																	.								.	.	.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.								.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		167	.	.	170	.	.	.	.	.	.	.	.				.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.				.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure														.	.	.																																						.	.	.
Query SS confidence														.	.	.																																						.	.	.
Query Sequence		S	T	L	P	M	L	A	K	M	T	P	N	.	.	.	I	G	D	M	C	E	V	A	L	A	A	K	R	G	G	A	D	G	I	A	A	I	N	T	V	K	S	I	T	N	I	D	L	N	Q	K	I	.	.	.	G	M	P	I	V	N	G	K	S	S	I	S	G	Y	S	G	K	A	V	K	P	I	A	L	R
Query Conservation														.	.	.																																						.	.	.
Alig confidence														.	.	.																																						.	.	.
Template Conservation
Template Sequence		T	G	E	V	K	G	H	Y	L	N	V	T	A	A	T	M	E	E	M	Y	A	R	A	N	F	A	K	E	L	G	S	V	I	I	M	I	D	L	V	I	G	Y	T	A	I	Q	T	M	A	K	W	A	R	D	N	D	M	I	L	H	L	H	R	A	G	N	S	T	Y	S	R	Q	K	N	H	G	M	N	F	R
Template Known Secondary structure			T	S			B								S	S														T	T		S						G	G	G															T	T								T	T	T					S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	Q	Q	M	R	T	H	P	E	L	R	D	F	P	I	S	G	I	G	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	C	K	W	M	R	M	A	G	V	D	H	I	H	A	G	T	V	V	G
Template Known Secondary structure											T		S							S	S	S
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions