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Job Description | P31120 | Confidence | 77.51% | Date | Thu Jan 5 11:47:07 GMT 2012 |
Rank | 32 | Aligned Residues | 67 |
% Identity | 18% | Template | c3qayC_ |
PDB info |
PDB header:lyase | Chain: C: PDB Molecule:endolysin; |
PDBTitle: catalytic domain of cd27l endolysin targeting clostridia difficile
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Resolution | 2.00 Å |
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174 | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | |
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190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . |
Predicted Secondary structure |   |
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Query Sequence |   |
E | L | K | I | V | V | D | C | A | N | G | A | T | Y | H | I | . |
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A | P | N | V | L | R | E | L | G | A | N | V | I | A | I | G | C | E | P | N | G | V | N | I | N | A | E | V | G | A | T | D | V | R | A | L | Q | A | R | V | L | A | E |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
H | M | K | I | C | I | T | V | G | H | S | I | L | K | S | G | A | C | T | S | A | D | G | V | V | N | E | Y | Q | Y | N | K | S | L | A | P | V | L | A | D | T | F | R | K | E | G | H | K | V | D | V | I | I | C | P | E | K | Q | F | K | T | K | N | . |
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E | E | K | S | Y | K | I | P | R | V | N | S | G |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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0 | . | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
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233 | . | . | . | . | . | . | 240 | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
K | A | D | L | G | I | A | F | D | G | D | G |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
G | Y | D | L | L | I | E | L | H | L | N | A |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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76 | . | . | . | 80 | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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