Job Description P31120 Confidence 71.39% Date Thu Jan 5 11:47:07 GMT 2012 Rank 35 Aligned Residues 109 % Identity 16% Template c2yxbA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:coenzyme b12-dependent mutase; PDBTitle: crystal structure of the methylmalonyl-coa mutase alpha-subunit from2 aeropyrum pernix Resolution 1.80 Å

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		172	.	.	.	.	.	.	.	180					.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.
Query SS confidence											.	.	.	.
Query Sequence		L	S	E	L	K	I	V	V	D	.	.	.	.	C	A	N	G	A	T	Y	H	I	A	P	N	V	L	R	E	L	G	A	N	V	I	A	I	G	C	E	P	N	G	V	N	I	N	A	E	V	G	A	T	D	V	R	A	L	Q	A	R	V	L	A	E	K	A	D	L	G	I	A	F	D	G	D	G	D	R	V
Query Conservation											.	.	.	.
Alig confidence											.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Template Sequence		R	R	R	Y	K	V	L	V	A	K	X	G	L	D	G	H	D	R	G	A	K	V	V	A	R	A	L	R	D	A	G	F	E	V	V	Y	T	G	L	R	Q	T	.	.	.	.	.	.	.	.	.	.	.	.	P	E	Q	V	A	X	A	A	V	Q	E	D	V	D	V	I	G	V	S	I	L	N	G	A	.	.
Template Known Secondary structure				S									S	S	S	S															T	T								S	B			.	.	.	.	.	.	.	.	.	.	.	.											T	T		S							S	S	S		.	.
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.													60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	M	V	D	H	E	G	N	K	V	D	G	D	Q	I	M	Y	I	I	A	R	E	G	L	R	Q	G	Q	L	R	G	G	A	V	G	T	L	M	S	N	M	G	L	E	L	A	L	K	Q	L	G	I	P	F	A	R	A	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	H	L	H	L	X	K	R	L	X	A	K	L	R	E	L	G	A	D	D	I	P	V	V	L	G	G	T	I	P	I	P	D	L	E	P	L	R	S	L	G	I	R	E	I	F	L	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.															T	T		T	T	S																			T	T							T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
													84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions