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Job DescriptionP31120
Confidence100.00%DateThu Jan 5 11:47:07 GMT 2012
Rank7Aligned Residues444
% Identity21%Templatec2fuvB_
PDB info PDB header:isomeraseChain: B: PDB Molecule:phosphoglucomutase; PDBTitle: phosphoglucomutase from salmonella typhimurium.
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40. ........50.........60.........70.... ..
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Query Sequence  MSNRKYFGTDGIRGRVGDAPITPDFVLKLGWAAGKVLARHG. SRKIIIGKDTRISGYMLESALEAGLAAAGLSAL. . . FT
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Template Sequence  AEHAVKFGTSGHRGSAGRHSFNEPHILAIAQAIAEERAKNGITGPCYVGKDTHALSEPAFISVLEVLAANGVDVIVQENN
Template Known Secondary structure  GGGS


BTTB
GGGTSSSTT

S

SSTTTT

GGG
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   36...40.........50.........60.........70.........80.........90.........100.........110.....
 
   77..80.........90... ......100.........110.........120.........130..... ....140.....
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Query Sequence  GPMPTPAVAYLTRTFRA. . . . . EAGIVISASHNPFYDNGIKFFSIDGTKLPDAVEEAIEAEMEK. . . . EISCVDSAEL. .
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Template Sequence  GFTPTPAVSNAILVHNKKGGPLADGIVITPSHNPPEDGGIKYNPPNGGPADTNVTKVVEDRANALLAGGLQGVKRISLDA
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TTTTT




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   116...120.........130.........140.........150.........160.........170.........180.........190.....
 
   146...150.........160....... ..170.........180.........190.........200.........210.........
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Query Sequence  . . . GKASRIVDAAGRYIEFCKATFP. NELSLSELKIVVDCANGATYHIAPNVLRELGANVIAIGCEPNGVNINAEVGA. .
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Template Sequence  AXASGHVKAVDLVQPFVEGLADIVDXAAIQKAGLTLGVDPLGGSGIEYWKRIAEHYKLNLTLVNDQVDQTFRFXHLDKDG
Template Known Secondary structure  TT


GGGTS
T


TT
TTTT

S




TT
TT
B

TTS
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   196...200.........210.........220.........230.........240.........250.........260.........270.....
 
   220.........230.........240.........250.........260.........270......... 280.........
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Query Sequence  . . . . . . . TDVRALQARVLAEKADLGIAFDGDGDRVIMVDHEGNKVDGDQIMYIIAREGLRQGQLRGG. . . AVGTLMSNMG
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Template Sequence  AIRXDCSSECAXAGLLALRDKFDLAFANDPDYDRHGIVTPAG. LXNPNHYLAVAINYLFQHRPLWGKDVAVGKTLVSSAX
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TT
TTTTTTGGG
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BTT.

TTS
TTS
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   276...280.........290.........300.........310....... ..320.........330.........340.........350....
 
   290.........300.........310.........320.........330.. .......340.........350.........360....
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Query Sequence  LELALKQLGIPFARAKVGDRYVLEKMQEKGWRIGAENSGHVIL. . . . . LDKTTTGDGIVAGLQVLAAMARNHMSLHDLCS
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Template Sequence  IDRVVNDLGRKLVEVPVGFKWFVDGLFDGSFGFGGEESAGASFLRFDGTPWSTDKDGIIXCLLAAEITAVTGKNPQEHYN
Template Known Secondary structure  T


SSGGGGTTSTTTB
TTSSBS
SS

SS
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   355....360.........370.........380.........390.........400.........410.........420.........430....
 
   365... .370.........380.........390.... .....400.........410........
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Query Sequence  GMKM. . . . FPQILVNVRYTAGSGDPLEHESVKAV. . . . . . . . . . . . . . . . . . . . . . TAEVEAALGNRGRVLLRKSGTEPL
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Template Sequence  ELAARFGAPSYNRLQASATSAQKAALSKLSPEXVSASTLAGDPITARLTAAPGNGASIGGLKVXTDNGWFAARPSGTEDA
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TT

GGG


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   435....440.........450.........460.........470.........480.........490.........500.........510....
 
   419420..... ....430.........440.....
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Query Sequence  IRVMVEG. EDEAQVTEFAHRIADAVKAV
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Template Sequence  YKIYCESFLGEEHRKQIEKEAVEIVSEV
Template Known Secondary structure  SS
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   515....520.........530.........540..
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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