 |
Job Description | P32681 | Confidence | 5.84% | Date | Thu Jan 5 11:50:07 GMT 2012 |
Rank | 62 | Aligned Residues | 43 |
% Identity | 12% | Template | c3rf1B_ |
PDB info |
PDB header:ligase | Chain: B: PDB Molecule:glycyl-trna synthetase alpha subunit; |
PDBTitle: the crystal structure of glycyl-trna synthetase subunit alpha from2 campylobacter jejuni subsp. jejuni nctc 11168
|
Resolution | 2.20 Å |
|
  |   |
83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | W | Q | G | D | N | L | T | L | I | N | I | N | V | Y | S | K | P | P | V | N | I | R | A | R | F | D | D | R | G | D | L | S | F | M | Q | R | E | S | D | G | E | K | Q | Q |
Query Conservation |   |
|
|
|   |
|   |
|
|
|
|   |
|   |   |   |
|   |   |
|   |   |
|   |
|
|
|
|   |   |
|   |
|
|
|
|
|   |   |   |   |
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|   | . |
|
|   |   |   |   |
|   |   |
|
|   |   |
|
|   |   |
|
|
|
|
|   |   |   |
|
|   |
|   | . |   |   |   |   |   |
|   |
Template Sequence |   |
R | F | V | E | D | N | . |
W | E | S | P | S | L | G | A | W | G | L | G | W | E | V | W | L | D | G | X | E | V | T | Q | F | T | Y | F | Q | Q | . |
V | G | G | I | A | V | D |
Template Known Secondary structure |   |
 |  |  |  |
|
| . |  |  |  | T | T | T | T |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  | . |  | T | T |  |  |
| S |
Template Predicted Secondary structure |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
109 | 110 | . | . | . | . | |
. | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | |
. | . | . | . | . | 150 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|