Return to main results Retrieve Phyre Job Id

Job DescriptionP42914
Confidence100.00%DateThu Jan 5 12:02:13 GMT 2012
Rank8Aligned Residues117
% Identity39%Templated2co7b1
SCOP infoImmunoglobulin-like beta-sandwich PapD-like Pilus chaperone
Resolution1.8

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20.........30.........40.........50.........60.........70.........80.........90.........
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  QALAGGIVLQRTRVIYDASRKEAALPVANKGAETPYLLQSWVDNIDGKSRAPFIITPPLFRLEAGDDSSLRIIKTADNLP
Query Conservation      
 
 
  



        
  
 
        

 
           





   
 
   
 



     

Alig confidence 






























.















































Template Conservation 

    
 
  



         
 
 
  .  
 


 
           


 


  
 
   
 


      

Template Sequence  ATKLFSVKLGATRVIYHAGTAGATLSVSNPQ. NYPILVQSSVKAADKSSPAPFLVMPPLFRLEANQQSQLRIVRTGGDMP
Template Known Secondary structure 






S
STTSS


S.SS
TTSSSB
SSS
TT






Template Predicted Secondary structure 










.


























Template SS confidence 















































































   8.10.........20.........30........ .40.........50.........60.........70.........80......
 
   100.........110.........120.........130.........140....
Predicted Secondary structure 


















Query SS confidence 












































Query Sequence  ENKESLFYINVRAIPAKKKSDDVNANELTLVFKTRIKMFYRPAHL
Query Conservation   



 
 
 
 


            
 
  
  



 

  
Alig confidence 



















.......

















Template Conservation   



   
 
  

     .......
       






  
Template Sequence  TDRETLQWVCIKAVPPETLD. . . . . . . LNLSINACDKLIFRPDAV
Template Known Secondary structure  SSS






.......




TT
Template Predicted Secondary structure 








.......





Template SS confidence 












































   87..90.........100...... ...110.........120....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions