Return to main results Retrieve Phyre Job Id

Job DescriptionP42914
Confidence41.29%DateThu Jan 5 12:02:13 GMT 2012
Rank45Aligned Residues104
% Identity16%Templatec3rb7E_
PDB info PDB header:metal binding proteinChain: E: PDB Molecule:na/ca exchange protein; PDBTitle: crystal structure of cbd12 from calx1.2
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40.........50.........60 .........70.........80..... ....90.........100...
Predicted Secondary structure 








.















.







Query SS confidence 


































.
























.

















Query Sequence  IVLQRTRVIYDASRKEAALPVANKGAETPYLLQSW. VDNIDGKSRAPFIITPPLFRLEAGD. DSSLRIIKTADNLPENKE
Query Conservation 
 
  



        
  
 
        

 
.           





   
 
  . 
 



     

 


Alig confidence 


































.
























.

















Template Conservation 
 
      
 
  
 
   
 
 
     


   
  


  
 

    




  

    
 
 
 

   
  
Template Sequence  MYFEPGHYTVMENCGEFEVRVVRRGDISTYASVEYETQDGTASAGTDFVGRKGLLSFPPGVDEQRFRIEVIDDDVFEEDE
Template Known Secondary structure  SS
B

TTSS
SSS


SSS
TTTTS




SS





SS



Template Predicted Secondary structure 






































Template SS confidence 















































































   444.....450.........460.........470.........480.........490.........500.........510.........520...
 
   104.....110.........120.........130
Predicted Secondary structure 












Query SS confidence 


























Query Sequence  SLFYINVRAIPAKKKSDDVNANELTLV
Query Conservation 
 
 
 
 


            
 
 
Alig confidence 
.
























Template Conservation   .
 
 

                   
Template Sequence  C. FYIRLFNPSEGVKLAVPMIATVMIL
Template Known Secondary structure  .


TT

B
SS
Template Predicted Secondary structure  .













Template SS confidence 


























   524 .....530.........540.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions