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Job DescriptionP42914
Confidence100.00%DateThu Jan 5 12:02:13 GMT 2012
Rank7Aligned Residues178
% Identity36%Templatec3q48B_
PDB info PDB header:chaperoneChain: B: PDB Molecule:chaperone cupb2; PDBTitle: crystal structure of pseudomonas aeruginosa cupb2 chaperone
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.........60........ .70.........80.........90.........100.
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Query Sequence  VLQRTRVIYDASRKEAALPVANKGAETPYLLQSWVDNIDGKS. . . . . RAPFIITPPLFRLEAGDDSSLRIIKTADNLPEN
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Template Sequence  IAQGTRVVFPASEREVTLRVSNTS. GTPVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRVEPNGGAVLRIAYLKAPLPTD
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BSSSTT
S
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GGGG

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SS
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   31........40.........50.... .....60.........70.........80.........90.........100.........
 
   102.......110.........120.........130.........140.........150.........160.........170.........180.
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Query Sequence  KESLFYINVRAIPAKKKSDDVNANELTLVFKTRIKMFYRPAHLKGRVNDAWKSLEFKRSDHSLNIYNPTEYYVVFAGLAV
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Template Sequence  RESLFWLNILEVP. . . . . . . . . . . . . . . . . RSRFKLFFRPSQLK. SVDSAAGKLQW. KFLTVVQVNNPTPYYVSFASVEL
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   110.........120.. .......130...... ...140....... ..150.........160.........170
 
   182.......190.........200.........210.........220........
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Query Sequence  . . DKTDLTSKIEYIAPGEHKQLPLPASGGKNVKWAAINDYGGSSGTETR
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Template Sequence  IVDGRVMSVGKGMVAPFSTKEFDWA. . . . ASVRYEVINDYGGRNTHDRA
Template Known Secondary structure  TT
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   193......200.........210....... ..220.........230.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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