Job Description P42914 Confidence 49.08% Date Thu Jan 5 12:02:13 GMT 2012 Rank 41 Aligned Residues 178 % Identity 13% Template c2je8B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:beta-mannosidase; PDBTitle: structure of a beta-mannosidase from bacteroides2 thetaiotaomicron Resolution 1.7 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																												.	.
Query SS confidence																												.	.
Query Sequence		Q	R	T	R	V	I	Y	D	A	S	R	K	E	A	A	L	P	V	A	N	K	G	A	E	T	P	.	.	Y	L	L	Q	S	W	V	D	N	I	D	G	K	S	R	A	P	F	I	I	T	P	P	L	F	R	L	E	A	G	D	D	S	S	L	R	I	I	K	T	A	D	N	L	P	E	N	K	E	S	L	F
Query Conservation																												.	.
Alig confidence																												.	.																						.
Template Conservation																																																			.
Template Sequence		A	P	V	L	I	N	P	I	Q	Q	N	D	S	L	S	V	Y	L	I	S	D	R	L	D	T	M	E	Q	M	T	L	E	M	K	V	V	D	F	D	G	K	T	L	G	K	K	I	Q	V	.	H	S	L	E	V	P	A	N	T	S	K	C	V	Y	R	A	K	L	D	G	W	L	T	P	E	D	C	R	R	S
Template Known Secondary structure			S									T	T											S	S														T	T	S										.							T	T										S	T	T	T	S						T	T
Template Predicted Secondary structure																																																			.
Template SS confidence
		677	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.		.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	N	V	R	A	I	P	A	K	K	K	S	D	D	V	N	A	N	E	L	T	L	V	F	K	T	R	I	K	M	F	Y	R	P	A	H	L	K	G	R	V	N	D	A	W	K	S	L	E	F	K	R	S	D	H	S	L	N	I	Y	N	P	T	E	Y	Y	V	V	F	A	G	L	A	V	D	K	T	D	L
Query Conservation
Alig confidence									.	.	.	.						.	.	.	.	.	.	.
Template Conservation									.	.	.	.						.	.	.	.	.	.	.
Template Sequence		F	L	K	L	I	L	K	.	.	.	.	D	K	S	G	H	.	.	.	.	.	.	.	Q	V	A	E	S	V	H	F	F	R	K	T	K	D	L	Q	L	P	P	T	S	V	S	Y	Q	M	K	Q	T	D	G	K	C	E	L	T	L	F	S	S	M	L	A	K	D	I	F	I	E	T	P	L	Q	G	A	R	Y
Template Known Secondary structure									.	.	.	.		T	T			.	.	.	.	.	.	.									S	S		G	G	G	S															T	T									S	S										S	S	T	T
Template Predicted Secondary structure									.	.	.	.						.	.	.	.	.	.	.
Template SS confidence
		756	.	.	.	760	.	.					.	.	.	.	.								.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210						.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.
Query SS confidence																										.	.	.	.	.
Query Sequence		T	S	K	I	E	Y	I	A	P	G	E	H	K	Q	L	P	L	P	A	S	G	G	K	N	.	.	.	.	.	V	K	W	A	A	I	N	D
Query Conservation																										.	.	.	.	.
Alig confidence																										.	.	.	.	.
Template Conservation
Template Sequence		S	D	N	F	F	D	L	L	P	G	E	R	K	K	V	I	I	T	S	P	R	I	K	K	G	E	E	L	P	V	N	I	K	H	I	R	E
Template Known Secondary structure		S			S					T	T										T	T			T	T	S									G	G	G
Template Predicted Secondary structure
Template SS confidence
		825	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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