Job Description P42914 Confidence 100.00% Date Thu Jan 5 12:02:13 GMT 2012 Rank 3 Aligned Residues 197 % Identity 36% Template c2co7B_ PDB info PDB header:fibril protein Chain: B: PDB Molecule:putative fimbriae assembly chaperone; PDBTitle: salmonella enterica safa pilin in complex with the safb2 chaperone (type ii) Resolution 1.8 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	L	A	G	G	I	V	L	Q	R	T	R	V	I	Y	D	A	S	R	K	E	A	A	L	P	V	A	N	K	G	A	E	T	P	Y	L	L	Q	S	W	V	D	N	I	D	G	K	S	R	A	P	F	I	I	T	P	P	L	F	R	L	E	A	G	D	D	S	S	L	R	I	I	K	T	A	D	N	L	P
Query Conservation
Alig confidence																																	.
Template Conservation																																	.
Template Sequence		A	T	K	L	F	S	V	K	L	G	A	T	R	V	I	Y	H	A	G	T	A	G	A	T	L	S	V	S	N	P	Q	.	N	Y	P	I	L	V	Q	S	S	V	K	A	A	D	K	S	S	P	A	P	F	L	V	M	P	P	L	F	R	L	E	A	N	Q	Q	S	Q	L	R	I	V	R	T	G	G	D	M	P
Template Known Secondary structure											S		S						T	T	S	S										S	.	S	S											T	T	S	S	S	B		S					S	S						T	T
Template Predicted Secondary structure																																	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	K	E	S	L	F	Y	I	N	V	R	A	I	P	A	K	K	K	S	D	D	V	N	A	N	E	L	T	L	V	F	K	T	R	I	K	M	F	Y	R	P	A	H	L	K	G	R	V	N	D	A	W	K	S	L	E	F	K	R	S	D	H	S	L	N	I	Y	N	P	T	E	Y	Y	V	V	F	A	G	L
Query Conservation
Alig confidence																						.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.
Template Sequence		T	D	R	E	T	L	Q	W	V	C	I	K	A	V	P	P	E	T	L	D	.	.	.	.	.	.	.	L	N	L	S	I	N	A	C	D	K	L	I	F	R	P	D	A	V	K	G	T	P	E	D	V	A	G	N	L	R	W	V	E	T	G	N	K	L	K	V	E	N	P	T	P	F	Y	M	N	L	A	S	V
Template Known Secondary structure		S	S	S																		.	.	.	.	.	.	.																T	T	S		S						G	G	G							T	T								S	S	S		B
Template Predicted Secondary structure																						.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.								.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	D	K	T	D	L	T	S	K	I	E	Y	I	A	P	G	E	H	K	Q	L	P	L	P	A	S	G	G	K	N	V	K	W	A	A	I	N	D	Y	G	G	S	S	G	T	E	T	R	P	L
Query Conservation
Alig confidence										.															.	.	.	.	.
Template Conservation										.															.	.	.	.	.
Template Sequence		T	V	G	G	K	P	I	T	.	G	L	E	Y	V	P	P	F	A	D	K	T	L	N	.	.	.	.	.	H	G	D	I	E	W	R	V	I	T	D	F	G	G	E	S	H	P	F	H	Y	V	L
Template Known Secondary structure				T	T					.					B		T	T							.	.	.	.	.									B		T	T	S	S	B
Template Predicted Secondary structure										.															.	.	.	.	.
Template SS confidence
		171	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.						.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions