Job Description P42914 Confidence 100.00% Date Thu Jan 5 12:02:13 GMT 2012 Rank 2 Aligned Residues 195 % Identity 30% Template c1z9sA_ PDB info PDB header:chaperone/immune system Chain: A: PDB Molecule:chaperone protein caf1m; PDBTitle: crystal structure of the native chaperone:subunit:subunit2 caf1m:caf1:caf1 complex Resolution 2.20 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	A	G	G	I	V	L	Q	R	T	R	V	I	Y	D	A	S	R	K	E	A	A	L	P	V	A	N	K	G	A	E	T	P	Y	L	L	Q	S	W	V	D	N	I	D	G	K	S	R	A	P	F	I	I	T	P	P	L	F	R	L	E	A	G	D	D	S	S	L	R	I	I	K	T	A	D	N	L	P	E
Query Conservation
Alig confidence																																.																		.	.
Template Conservation																																.																		.	.
Template Sequence		S	K	E	Y	G	V	T	I	G	E	S	R	I	I	Y	P	L	D	A	A	G	V	M	V	S	V	K	N	T	Q	.	D	Y	P	V	L	I	Q	S	R	I	Y	D	E	N	K	E	K	.	.	P	F	V	V	T	P	P	L	F	R	L	D	A	K	Q	Q	N	S	L	R	I	A	Q	A	G	G	V	F	P	R
Template Known Secondary structure										S	S	S						T	T		S										S	.	S	S											T	T	S			.	.						S	S						T	T											S					S
Template Predicted Secondary structure																																.																		.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		N	K	E	S	L	F	Y	I	N	V	R	A	I	P	A	K	K	K	S	D	D	V	N	A	N	E	L	T	L	V	F	K	T	R	I	K	M	F	Y	R	P	A	H	L	K	G	R	V	N	D	A	W	K	S	L	E	F	K	R	S	D	H	S	L	N	I	Y	N	P	T	E	Y	Y	V	V	F	A	G	L	A
Query Conservation
Alig confidence																						.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.
Template Sequence		D	K	E	S	L	K	W	L	C	V	K	G	I	P	P	D	V	G	V	F	.	.	.	.	.	.	V	Q	F	A	I	N	N	C	I	K	L	L	V	R	P	N	E	L	K	G	T	P	I	Q	F	A	E	N	L	S	W	K	V	D	G	G	K	L	I	A	E	N	P	S	P	F	Y	M	N	I	G	E	L	T
Template Known Secondary structure		S	S																			.	.	.	.	.	.																T	T	S		S		G	G	G	T	G	G	G							T	T								S	S	S
Template Predicted Secondary structure																						.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.							110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	K	T	D	L	T	S	K	I	E	Y	I	A	P	G	E	H	K	Q	L	P	L	P	A	S	G	G	K	N	V	K	W	A	A	I	N	D	Y	G	G	S	S	G	T	E	T	R	P	L
Query Conservation
Alig confidence										.	.														.	.	.	.
Template Conservation										.	.														.	.	.	.
Template Sequence		F	G	G	K	S	I	P	S	.	.	H	Y	I	P	P	K	S	T	W	A	F	D	L	.	.	.	.	A	R	N	V	S	W	R	I	I	N	D	Q	G	G	L	D	R	L	Y	S	K	N	V
Template Known Secondary structure			T	T						.	.					T	T								.	.	.	.									B		T	T	S		B
Template Predicted Secondary structure										.	.														.	.	.	.
Template SS confidence
		184	.	.	.	.	.	190	.			.	.	.	.	.	.	.	.	200	.	.	.	.					.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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