Job Description P42914 Confidence 100.00% Date Thu Jan 5 12:02:13 GMT 2012 Rank 5 Aligned Residues 189 % Identity 36% Template c1qpxA_ PDB info PDB header:chaperone Chain: A: PDB Molecule:papd chaperone; PDBTitle: crystal structures of self-capping papd chaperone homodimers Resolution 2.40 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100
Predicted Secondary structure																																														.	.																														.	.
Query SS confidence																																														.	.																														.	.
Query Sequence		G	I	V	L	Q	R	T	R	V	I	Y	D	A	S	R	K	E	A	A	L	P	V	A	N	K	G	A	E	T	P	Y	L	L	Q	S	W	V	D	N	I	D	G	K	S	.	.	R	A	P	F	I	I	T	P	P	L	F	R	L	E	A	G	D	D	S	S	L	R	I	I	K	T	A	D	N	.	.	L	P	E
Query Conservation																																														.	.																														.	.
Alig confidence																																														.	.																														.	.
Template Conservation
Template Sequence		A	V	S	L	D	R	T	R	A	V	F	D	G	S	E	K	S	M	T	L	D	I	S	N	D	N	K	Q	L	P	Y	L	A	Q	A	W	I	E	N	E	N	Q	E	K	I	I	T	G	P	V	I	A	T	P	P	V	Q	R	L	D	P	G	A	K	S	M	V	R	L	S	T	T	P	D	I	S	K	L	P	Q
Template Known Secondary structure						S		S						T	T	S	S											S	S	S											T	T	S				S	S	S	S					S	S						T	T											G	G	G	G	G	S		S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.		.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		N	K	E	S	L	F	Y	I	N	V	R	A	I	P	A	K	K	K	S	D	D	V	N	A	N	E	L	T	L	V	F	K	T	R	I	K	M	F	Y	R	P	A	H	L	K	G	R	V	N	D	A	W	K	.	S	L	E	F	K	R	S	D	H	S	L	N	I	Y	N	P	T	E	Y	Y	V	V	F	A	G	L
Query Conservation																																																							.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	R	E	S	L	F	Y	F	N	L	R	E	I	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	L	C	T	K	I	K	L	F	Y	R	P	A	A	I	K	T	R	P	N	E	V	W	Q	D	Q	L	I	L	N	K	V	S	G	G	Y	R	I	E	N	P	T	P	Y	Y	V	T	V	I	G	L
Template Known Secondary structure		S	S														.	.	.	.	.	.	.	.	.	.	.	.	.														G	G	G				T	T				G	G	G							T	T								S	S	S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.														.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		180	.	.	.	.	.	.	.	.				.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.
Query SS confidence											.	.	.
Query Sequence		A	V	D	K	T	D	L	T	S	.	.	.	K	I	E	Y	I	A	P	G	E	H	K	Q	L	P	L	P	A	S	G	G	K	N	V	K	W	A	A	I	N	D	Y	G	G	S	S	G	T	E	T	R
Query Conservation											.	.	.
Alig confidence											.	.	.																	.	.
Template Conservation																														.	.
Template Sequence		G	G	S	E	K	Q	A	E	E	G	E	F	E	T	V	M	L	S	P	R	S	E	Q	T	V	K	S	A	.	.	N	Y	N	T	P	Y	L	S	Y	I	N	D	Y	G	G	R	P	V	L	S	F	I
Template Known Secondary structure			S	S							S									T	T									.	.			S	S								T	T	S
Template Predicted Secondary structure																														.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.			.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions