Job Description P0AD17 Confidence 11.21% Date Wed Jan 25 15:20:24 GMT 2012 Rank 5 Aligned Residues 114 % Identity 17% Template c3rkoN_ PDB info PDB header:oxidoreductase Chain: N: PDB Molecule:nadh-quinone oxidoreductase subunit n; PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	M	Q	V	I	N	R	E	N	E	T	I	S	H	H	Y	T	H	H	V	L	L	M	A	A	I	P	V	I	C	A	F	I	G	T	T	Q	I	G	W	N	F	G	D	G	T	I	L	K	L	S	W	F	T	G	L	A	L	A	V	L	F	Y	G	V	M	L	A	G	V	A	V	M	G	R	V	I	W	W
Query Conservation
Alig confidence																																																			.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.
Template Sequence		F	S	Y	R	G	L	F	W	H	R	P	I	L	A	A	V	M	T	V	M	M	L	S	L	A	G	I	P	M	T	L	G	F	I	G	K	F	Y	V	L	A	V	G	V	Q	A	H	L	W	.	.	.	.	.	.	.	.	W	L	V	G	A	V	V	V	G	S	A	I	G	L	Y	Y	Y	L	R	V	A	V	S
Template Known Secondary structure		G	G		S	S		T	T	T	S														T	T	T		T	T	S																T	T			.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.
Template SS confidence
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.									.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	R	N	Y	P	Q	R	P	S	L	A	H	C	M	V	F	A	G	Y	V	A	T	P	L	F	L	S	G	L	V	A	L	Y	P	L	V	W	L	C	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Y	L	H	A	P	E	Q	P	S	N	W	Q	Y	S	A	G	G	I	V	V	L	I	S	A	L	L	V	L	V	L	G	V	W	P	Q	P	L	I	S	I	V
Template Known Secondary structure				S								S	T	T
Template Predicted Secondary structure
Template SS confidence
		432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions