Job Description P0AD17 Confidence 2.31% Date Wed Jan 25 15:20:24 GMT 2012 Rank 77 Aligned Residues 131 % Identity 18% Template c3hd6A_ PDB info PDB header:membrane protein, transport protein Chain: A: PDB Molecule:ammonium transporter rh type c; PDBTitle: crystal structure of the human rhesus glycoprotein rhcg Resolution 2.10 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	S	H	P	D	R	E	M	Q	V	I	N	R	E	N	E	T	I	S	H	H	Y	T	H	H	V	L	L	M	A	A	I	P	V	I	C	A	F	I	G	T	T	Q	I	G	W	N	F	G	D	G	T	I	L	K	L	S	W	F	T	G	L	A	L	A	V	L	F	Y	G	V	M	L	A	G	V	A	V	M
Query Conservation
Alig confidence																					.	.	.	.	.	.																		.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.																		.	.	.	.	.	.
Template Sequence		R	I	L	Y	R	R	N	L	E	Q	S	K	E	R	Q	N	S	V	Y	.	.	.	.	.	.	Q	S	D	L	F	A	M	I	G	T	L	F	L	W	M	Y	W	.	.	.	.	.	.	P	S	F	N	S	A	I	S	Y	H	G	D	S	Q	H	R	A	A	I	N	T	Y	C	S	L	A	A	C	V	L	T	S
Template Known Secondary structure				T			T	T	G	G	G	G	T	T	T	S	S				.	.	.	.	.	.																		.	.	.	.	.	.				T	T	T	T		S	S
Template Predicted Secondary structure																					.	.	.	.	.	.																		.	.	.	.	.	.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.							.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.							.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.							.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.				.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.																								.	.	.
Query SS confidence																																									.	.	.	.	.	.																								.	.	.
Query Sequence		G	R	V	I	W	W	M	A	R	N	Y	P	Q	R	P	S	L	A	H	C	M	V	F	A	G	Y	V	A	T	P	L	F	L	S	G	L	V	A	L	.	.	.	.	.	.	Y	P	L	V	W	L	C	A	L	V	G	T	V	A	L	F	Y	T	G	Y	L	L	Y	.	.	.	L	G	I	P	S	F	L	N	I
Query Conservation																																									.	.	.	.	.	.																								.	.	.
Alig confidence											.	.														.	.	.	.	.	.	.	.								.	.	.	.	.	.																								.	.	.
Template Conservation											.	.														.	.	.	.	.	.	.	.
Template Sequence		V	A	I	S	S	A	L	H	K	.	.	K	G	K	L	D	M	V	H	I	Q	N	A	T	.	.	.	.	.	.	.	.	L	A	G	G	V	A	V	G	T	A	A	E	M	M	L	M	P	Y	G	A	L	I	I	G	F	V	C	G	I	I	S	T	L	G	F	V	Y	L	T	P	F	L	E	S	R	L	H	I
Template Known Secondary structure								T	S	T	.	.	T											G	G	.	.	.	.	.	.	.	.	G						T	T	T	T	T	T	T		S
Template Predicted Secondary structure											.	.														.	.	.	.	.	.	.	.
Template SS confidence
		265	.	.	.	.	270	.	.	.			.	.	.	.	.	.	280	.	.	.	.	.	.									.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		158	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		335	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions