 |
Job Description | P0AD17 | Confidence | 2.33% | Date | Wed Jan 25 15:20:24 GMT 2012 |
Rank | 76 | Aligned Residues | 16 |
% Identity | 19% | Template | c2gofA_ |
PDB info |
PDB header:viral protein | Chain: A: PDB Molecule:vpu protein; |
PDBTitle: three-dimensional structure of the trans-membrane domain of2 vpu from hiv-1 in aligned phospholipid bicelles
|
Resolution | UNK |
|
  |   |
174 | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | L | V | L | E | V | L | L | A | L | T | V | I | L | W | G |
Query Conservation |   |
|
|   |   |
|   |   |   |   |   |   |
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Sequence |   |
I | V | A | L | V | V | A | I | I | I | A | I | V | V | W | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|