|   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | |
|
|
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | |
|
. | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
Query Sequence |   |
S | Q | A | L | V | P | L | S | T | E | Q | Q | A | A | W | R | A | V | A | E | T | E | K | R | R | . |
. |
. |
H | Q | G | N | T | L | A | E | Y | P | Y | A | G | A | F | F | R | C | L | N | G | S | R | R | I | S | L | S | D | L | R | F | F | M | P | S | L | T | A | E | E | L | H | G | N | R | L | . |
. |
Q | W | L |
Query Conservation |   |
  |
|
|
|
|
|
|   |   |   |
|
|
|
|   |   |
|
|   |   |
|
|   |
|
| . | . | . |   |   |
|   |   |
|
|
|   |
|
|
|   |
|
|
|
|   |
|
|
|   |   |   |
|   |   |
|
|
|
|   |   |   |
|   |
|   |
|   |   |
|
|   |
|   |
| . | . |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
Template Conservation |   |
  |
|   |   |
|   |   |   |   |
|
|   |   |
|   |   |
|   |
|
|   |
|
|   |
|
|   |   |
|   |
|
|
|   |   |   |
| . | . |   |
|
|   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|   |
|   |   | . | . | . |   |   |   |   |   |
|
|   |   |
|
|   |   |
|   |   |
Template Sequence |   |
K | R | F | Y | V | S | I | D | K | I | P | E | H | V | I | N | A | F | V | A | T | E | D | R | N | F | W | H | H | F | G | I | D | P | V | A | I | . |
. |
V | R | A | A | I | V | N | V | Q | G | G | S | T | I | T | Q | Q | L | A | K | N | L | . |
. |
. |
F | L | T | R | E | R | T | L | E | R | K | I | K | E | A | L |
Template Known Secondary structure |   |
G | S |
|
|
|
| G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |  |
| T | T | T | T | T | S | S | S | S |
|  |  |  |  | . | . |  |  |  |  | S |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  | T | T | . | . | . | S | S | S |
|
|
|
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  | . | . |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | . |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
62 | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | |
|
. | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | |
|
|
. | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . |
  |
  |   |
80 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
Query Sequence |   |
Y | A | I | D | V |
Query Conservation |   |
  |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
Template Sequence |   |
L | A | I | K | I |
Template Known Secondary structure |   |
 |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
  |   |
143 | . | . | . | . |
  |