 |
| Job Description | P18148 | | Confidence | 16.44% | Date | Thu Jan 5 11:36:42 GMT 2012 |
| Rank | 26 | Aligned Residues | 33 |
| % Identity | 12% | Template | c3olmA_ |
| PDB info |
PDB header:ligase | Chain: A: PDB Molecule:e3 ubiquitin-protein ligase rsp5; |
PDBTitle: structure and function of a ubiquitin binding site within the2 catalytic domain of a hect ubiquitin ligase
|
| Resolution | 2.50 Å |
|
|   |   |
33 | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|  |  |  |  |  |  |
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
N | T | L | A | E | Y | P | Y | A | G | A | F | F | R | C | L | N | G | S | R | R | I | S | L | S | D | L | R | F | F | M | P | S | L |
| Query Conservation |   |
  |   |
|
|
|   |
|
|
|   |
|
|
|
|   |
|
|
|   |   |   |
|   |   |
|
|
|
|   |   |   |
|   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |
|   |   |   |
|   |   |   |
|   |
|   |
|
|
|   | . |   |   |
|
|   |
|
|   |   |
|
|
|   |   |
| Template Sequence |   |
R | R | F | L | D | A | F | F | V | G | A | L | Y | K | M | M | L | R | K | . |
K | V | V | L | Q | D | M | E | G | V | D | A | E | V |
| Template Known Secondary structure |   |
T |
|
|
|
|
|
| B |
|  |  |  |  |  |  |  | T | T |
| . |
|
|
|  |  |  |  |  |  |  |
|  |  |  |
| Template Predicted Secondary structure |   |
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
| . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
559 | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | |
. | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|