Return to main results Retrieve Phyre Job Id

Job DescriptionP18148
Confidence45.88%DateThu Jan 5 11:36:42 GMT 2012
Rank3Aligned Residues54
% Identity22%Templatec2l5yA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:stromal interaction molecule 2; PDBTitle: nmr structure of calcium-loaded stim2 ef-sam.
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33...... 40.........50.. .......60.........70.........80......
Predicted Secondary structure 


.



...






Query SS confidence 






.












. . .

































Query Sequence  NTLAEYP. YAGAFFRCLNGSR. . . RISLSDLRFFMPSLTAEELHGNRLQWLYAIDVLI
Query Conservation    


 
.

 



 


  ... 
  



   
 
 
  

 
 
 

 


 

Alig confidence 






.












...

































Template Conservation     


 

   
    


  
  
   
   

  


    

 

 







Template Sequence  IEFVELPQYEKNFRDNNVKGTTLPRIAVHEPSFMISQLKISDRSHRQKLQLKALDVVL
Template Known Secondary structure  T

TTS
SSSTTTT

SSS

STTTTSS


Template Predicted Secondary structure 












Template SS confidence 

























































   146...150.........160.........170.........180.........190.........200...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions