 |
| Job Description | P18148 | | Confidence | 8.57% | Date | Thu Jan 5 11:36:42 GMT 2012 |
| Rank | 74 | Aligned Residues | 18 |
| % Identity | 28% | Template | c1bmxA_ |
| PDB info |
PDB header:viral protein | Chain: A: PDB Molecule:human immunodeficiency virus type 1 capsid; |
PDBTitle: hiv-1 capsid protein major homology region peptide analog,2 nmr, 8 structures
|
| Resolution | UNK |
|
| | |
31 | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . |
| Predicted Secondary structure | |
 |
|
|
|
| | | | | | | | | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
Q | G | N | T | L | A | E | Y | P | Y | A | G | A | F | F | R | C | L |
| Query Conservation | |
|
| | |
|
|
| |
|
|
| |
|
|
|
| |
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
|
|
|
| |
|
| |
|
|
|
|
|
|
| |
|
| Template Sequence | |
Q | G | P | K | E | P | F | R | D | Y | V | D | R | F | Y | K | T | L |
| Template Known Secondary structure | |
|
|
|
| | | | | | | | | | | | | | |
| Template Predicted Secondary structure | |
|
|
| | | | | | | | | | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
