Job Description Q46948 Confidence 100.00% Date Thu Jan 5 12:36:06 GMT 2012 Rank 13 Aligned Residues 175 % Identity 18% Template c3graA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, arac family; PDBTitle: crystal structure of arac family transcriptional regulator from2 pseudomonas putida Resolution 2.30 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30							.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.
Query Sequence		A	S	A	L	V	C	L	A	P	G	S	E	E	T	E	A	V	T	T	I	D	L	L	V	R	G	G	I	.	.	.	.	.	.	K	V	T	T	A	S	V	A	S	D	G	N	L	A	I	T	C	S	R	G	V	K	L	L	A	D	A	P	L	V	E	V	A	D	G	E	Y	D	V	I	V	L	P	G	G	I
Query Conservation																														.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.											.	.	.																			.
Template Conservation																																														.	.	.																			.
Template Sequence		Y	R	V	D	F	I	L	L	E	H	F	S	X	A	S	F	T	V	A	X	D	V	L	V	T	A	N	L	L	R	A	D	S	F	Q	F	T	P	L	S	L	D	G	D	.	.	.	R	V	L	S	D	L	G	L	E	L	V	A	T	E	L	S	A	A	.	A	L	K	E	L	D	L	L	V	V	C	G	G	L
Template Known Secondary structure										T	T	B																			S	T	T	S								S	S	S	S	.	.	.				B	T	T	S										S	G	.	G	G	T	T		S								T
Template Predicted Secondary structure																																														.	.	.																			.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.				.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																																															.	.
Query SS confidence																																																															.	.
Query Sequence		K	G	A	E	C	F	R	D	S	T	L	L	V	E	T	V	K	Q	F	H	R	S	G	R	I	V	A	A	I	C	A	A	P	A	T	V	L	V	P	H	D	I	F	P	I	G	N	M	T	G	F	P	T	L	K	D	K	I	P	A	E	.	.	Q	W	L	D	K	R	V	V	W	D	A	R	V	K	L	L	T
Query Conservation																																																															.	.
Alig confidence		.	.	.																												.																															.	.
Template Conservation		.	.	.																												.
Template Sequence		.	.	.	R	T	P	L	K	Y	P	E	L	D	R	L	L	N	D	C	A	A	H	G	X	A	L	G	G	L	W	.	N	G	A	W	F	L	G	R	A	G	V	L	D	D	Y	G	C	S	I	H	P	E	Q	R	A	S	L	S	E	R	S	P	Q	T	R	I	T	P	A	S	F	T	L	D	R	D	R	L	S
Template Known Secondary structure		.	.	.	T			S			T	T												T							T	.	T									T			T	T							G	G	G									T	T					S	S	S					T	T
Template Predicted Secondary structure		.	.	.																												.
Template SS confidence
					106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	G	P	G	T	A	I	D	F	G	L	K	I	I	D	L	L	V	G	R	E	K	A	H	E	V	A	S	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	S	P	N	G	A	X	E	L	X	L	G	L	V	R	R	L	Y	G	D	G	L	A	E	G	V	E	E	I	L
Template Known Secondary structure			S	S
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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