Job Description Q46948 Confidence 95.52% Date Thu Jan 5 12:36:06 GMT 2012 Rank 53 Aligned Residues 90 % Identity 18% Template c3fijD_ PDB info PDB header:structural genomics, unknown function Chain: D: PDB Molecule:lin1909 protein; PDBTitle: crystal structure of a uncharacterized protein lin1909 Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		M	S	A	S	A	L	V	C	L	A	P	G	S	E	E	T	E	A	V	T	T	I	D	L	L	V	R	G	G	I	K	V	T	T	A	S	V	A	S	D	G	N	L	A	I	T	C	S	R	G	V	K	L	L	A	D	A	P	L	V	E	V	A	D	G	E	Y	D	V	I	V	L	P	G	G	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	K	P	V	I	G	I	T	G	Q	.	.	.	.	.	.	.	.	Q	R	Y	V	D	A	I	Q	K	V	G	G	F	P	I	A	L	P	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	P	S	T	A	V	Q	A	I	S	L	V	D	G	L	L	L	T	G	G	Q	D	I	T	P
Template Known Secondary structure												.	.	.	.	.	.	.	.										T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			G	G	G							T		S								S				G
Template Predicted Secondary structure												.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.									.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.																		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.
											76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	I	K	G	A	E	C	F	R	D	S	T	L	L	V	E	T	V	K	Q	F	H	R	S	G	R	I	V	A	A	I	C	A	A	P	A	T	V	L	V	P	H
Query Conservation		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																																.
Template Conservation																																										.
Template Sequence		Q	L	Y	L	E	E	P	S	Q	E	I	G	A	Y	F	P	P	R	D	S	Y	E	I	A	L	V	R	A	A	L	D	A	G	K	P	I	F	A	I	C	.	R	G	X	Q	L	V	N	V	A
Template Known Secondary structure		G	G	G	T					T	T																							T							T	.
Template Predicted Secondary structure																																										.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions