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Job DescriptionQ46948
Confidence100.00%DateThu Jan 5 12:36:06 GMT 2012
Rank6Aligned Residues166
% Identity19%Templatec3cneD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:putative protease i; PDBTitle: crystal structure of the putative protease i from bacteroides2 thetaiotaomicron
Resolution1.99 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60... ......70.........
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Query Sequence  SASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVEVA. . DGEYDVIVLPGGIKGA
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Template Sequence  AKKVAVLAVNPVNGCGLFQYLEAFFENGISYKVFAVSDTK. . EIKTNSGXVLIVDDVIANLKGHEDEFDALVFSCGDAVP
Template Known Secondary structure 


SSB
TT
SSSSS..BTTS

SGGGTTT
GGG
S

TTGG
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Query Sequence  ECFRD. . . . . STLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIGNMTGFPTLKDKIPAEQWLDKRVVWDARVKLLT
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Template Sequence  VFQQYANQPYNVDLXEVIKTFGEKGKXXIGHC. AGAXXFDFTGITKGKKVAVHPLAKPAIQNGIATDEKSEIDG. . NFFT
Template Known Secondary structure  GTTTTTTSTT
T.TTTTTTT


TTTGGG
SSSSSST..T
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   80.........90.........100.........110. ........120.........130.........140.........150.. ....
 
   155....160.........170..
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Query Sequence  SQGPGTAIDFGLKIIDLL
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Template Sequence  AQDENTIWTXLPKVIEAL
Template Known Secondary structure  SSGGGGGGT
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   157..160.........170....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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